Pseudoliparis swirei (Mariana hadal snailfish): 130189524
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Entry
130189524 CDS
T09868
Symbol
znf827
Name
(RefSeq) zinc finger protein 827
KO
K27104
zinc finger protein 827
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130189524 (znf827)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130189524 (znf827)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_16
zf-H2C2_2
zf-C2H2_4
zf-H2C2_5
HVO_2753_ZBP
zf-Di19
zf-C2H2_6
zf-C2H2_5
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
130189524
NCBI-ProteinID:
XP_056264342
LinkDB
All DBs
Position
24:7580680..7643504
Genome browser
AA seq
1517 aa
AA seq
DB search
MPRRKQEQPKRLPSQVDSNEEGGPDDGPVEEEGWFGNASDTRSESSSYGDTQDELLLARG
SSPDERPGVGAGSGDHDTCGGESALGCPTPVHRASLELLGLDGGAFSAQDTLSSVVSSLY
GEAASRALGKPLSSNLRRLLEAGSLKLDTGELLGRSSRGCAGGESPPMGLPPPLTLSPSS
HHAQHLSALARKLANNNNNNSGSASPASLAPSVTNIKQEPLDPFNSVTPSNGSGFVWAGV
ADKWPPASCSTPCGSSLSPDSAIQKLKAAANAVLQDKSAVASSSTTLSTSSASSALPALG
GGGRGDDAVRFDAFNSPFSPQSASSTLAALSKKVSERSHTSSTPSAATDHQSSNSFLSLV
SMTSSAALLKEVAARAAGNLLAEKKDGSSLATAGVLQEDVKPLLDKNQRAPTPSTPNHSL
DLLLPSTPKNRGKPNSQAGSPEDGGKPFQCPVCGLVIKRKSYWKRHMVIHTGLKSHQCPL
CPFRCARKDNLKSHMKVHQHQDRGETFQCELCPFTSSRHFSLKLHMRCHQHFPHSDVKVK
EELTTDTEGEGSLMGDSGPADLGGTEVSPLHSDSQQQTSSPVEASSNHVHIKEEPQERDL
SVLSPFNMCRDRPSSSVNSLDLSGVGLGVGVRSISSGPTIASIFSNDITTKTATDLLMKL
SAASQREMLKSPFHLKEEPKVEEAVSPRPFSQSQSQVQPSFPASFCHNGPVGAAAATERP
GSLKPREGSPRAKNTLLNQDINIKAASELLIKLSENNKDHYERVKVKAEPMEVDPPPVEL
TQPASFLRAFGTFGASEKTEPMSNLLETLARPQKDLFSQDISVKMASELLFKLSEKVSKA
NNLKDSNMVGINSSFLDECFRQSPFNSRSKSSSPAEPSSSARALFHDSEKDDGEPGNGIA
PWRLSEQLFPCPVCGKVFGRQQTLSRHLSLHTDERKYKCHLCPYAAKCRANLNQHLTIHS
VKLVNTDAEQIVSAVTAESAERKNCLYYYSCHVCDFQTELNAQFVSHMSLHVDKEQWMFS
LCCSVCDFVCMEENDMKNHMSSGHAGLSSRSPLSETKSTSSSLSALSDSLNSSEGGDLNH
SNDELRGLLALPSSAGSQSSSGSHSGSGTEDKSDKGFECVFCNFVCKTRSMYERHLQIHL
ITRMFECDVCHKFLKTPEQLLEHKKCHTVPSGGLKCPFCIYSTNRPAAMECHLKTHRKME
YRCRICQGLWPDQASLEAHVRGHRLGNHYKCERCGYLSKTANKLIEHVRVHTGERPFHCD
RCSYSCKRKDNLNLHKKLKHAPRPTLGCRECPFTTTHTLVFSRHLEKHRSAGAGGPDGGE
GGEEEEEEEEEEAEVEDDGEEAGEEEKEEEEEEPAAAAASSLRTSGESFLFGGGGGSSSN
SPLMSLTASRALQSVALSLTLGTPRRLDAVGTNGNNNNNNGGTARGPGGPSSLFPPSPRH
MLEQSRSCGRAHLIPLTAAFTHSRRFTFHSRWRPAAPPLLFSSDAASPSRSSSSSSPSSH
KHSFLAYLGLTERAKTV
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaggaagcaggagcaacccaagcgcctgccttcacaagtggacagcaacgag
gaaggagggcctgatgatggtccagtggaggaagaaggctggtttgggaatgcttctgac
acgcgctcagagtcgtcgtcctatggagacacccaggatgaactcctccttgccaggggc
tcctctcccgatgaacggcccggagtcggcgctgggtccggggaccacgatacctgtgga
ggtgagagcgcattgggttgccccacacccgtccatcgtgcctctttggaacttctcgga
ctggatggaggtgcattctcggcccaggacacactctcttctgtggtgtcgtcactgtac
ggcgaggcagcgtctcgtgccctgggaaaacccctcagcagcaacctgcggcgcctcctt
gaggccggctcgctgaaactcgacactggggagctgctgggtcggtcatcccggggatgt
gctgggggggagtcacctccaatgggtctacccccgcctctgactctctcaccatcttcc
caccatgcccaacatttaagtgctcttgcccgaaaactagccaataacaacaacaacaac
agcggctcagcctcaccagcctccttggcaccctcagtcactaacattaagcaagagccc
cttgatccctttaactctgttaccccgagcaacggcagtggctttgtatgggcaggtgtt
gcagataagtggccaccggccagctgctccacgccctgtggctccagcctatccccggac
tccgcaatccagaagttaaaagcagcggcgaatgccgtgcttcaagacaagagtgccgtg
gcctcctcctcaacgactttgtccacctcctccgcctcgtctgcactgcccgccctcgga
gggggcggtcgaggagatgacgcggtgcgctttgatgccttcaactctccgttcagccca
cagtccgcgagctccaccctcgccgcactttccaagaaagtcagcgagcggagccacacc
tcgtcaacgcccagcgctgctaccgatcaccaatcctccaattccttcctctcgcttgtg
tcgatgacctcctctgctgccttgctcaaagaggtggcagccagggcagcgggaaacctg
ctggcagagaagaaagacggttcctccttggccactgctggagtcctccaagaggatgtg
aagcccctgctggacaagaaccagagagcccccacgccctctacgcccaaccacagcctc
gacttgctgctgccctctactccgaagaacagaggcaaaccaaacagccaagcaggctct
cctgaggatggtggcaaaccgttccagtgtcccgtgtgtggactggtcatcaaacgcaag
agctactggaagagacacatggtcatccacacaggcttgaaaagccaccagtgtcccctg
tgtcccttccgctgcgcgcgcaaagacaatctaaagtcccacatgaaggtacatcagcac
caggaccggggtgagacatttcagtgtgaactttgccccttcacctcctcccgtcacttc
agcctgaagcttcacatgcgctgccaccagcacttcccccactcggacgtcaaggtgaaa
gaggagctcaccaccgacacggagggcgagggctctctgatgggtgacagcggccccgcg
gacctgggagggacggaggtgtcgccactgcactcggacagccagcagcagacgtcctct
ccggtcgaggcttcctccaatcacgtccacatcaaggaggagccgcaggagagagatctg
tctgtgctctccccctttaacatgtgcagggaccgtcccagcagcagcgtcaactccttg
gacctatcgggagttgggttaggagtcggggtcagatccatttctagtggtccaaccata
gcctccatcttcagcaatgacatcactaccaagacggcaactgacctgcttatgaagctt
tcagcggccagccagagggagatgctcaagtctccattccacctgaaggaagagcccaaa
gtggaggaagcagtgagccctcggccattctcccagtcccagagccaggtacagccaagc
ttccctgcaagtttctgccacaacgggccagtgggggcggcagccgccacggagcgtcca
gggtcactgaaaccaagggaaggaagtcccagggctaagaataccttgctgaaccaggat
atcaacattaaggctgcctctgagctgctgattaagctttcagagaacaacaaagatcat
tacgagagggtgaaagtaaaggcagagcccatggaggtggacccaccccccgttgaactc
acccaacctgcctctttcctgcgggcctttggcactttcggggcaagtgagaagactgag
ccaatgagtaaccttctagagacgttggcccgcccccagaaagacctgttctcccaggac
atatcggtcaaaatggcctcagaactactgttcaaattgtcagaaaaagtcagcaaagcc
aacaacctcaaagacagtaacatggtgggaataaacagttcgttcctggacgagtgcttc
agacaatcaccctttaactcgcgctccaagagctcttcccccgcagaacccagctcttct
gccagggcactattccatgactcggaaaaggatgacggggagccgggaaacgggattgcc
ccgtggagactcagcgaacagctcttcccctgccccgtctgtggcaaagtgttcggcaga
cagcagacgctttctagacatctgtctctccacacagacgagaggaagtacaagtgccac
ttgtgtccgtatgcagccaagtgcagggctaacctcaatcagcacctgaccatccactcc
gtcaagctggtcaatacggatgctgagcagattgtcagcgctgttacagccgagtccgcc
gagcgcaagaactgcctctactactacagctgccatgtgtgtgatttccagacggagctg
aatgcccagtttgtcagccacatgtcgctccatgtggacaaggagcagtggatgttctcg
ctctgctgcagcgtctgtgacttcgtctgcatggaggagaacgacatgaagaaccacatg
agcagcgggcacgcaggtctgagctccagaagtcccctcagcgagaccaagagcacctcc
tcttccctctcggccctcagcgactcactcaacagctcggagggcggagacctcaaccac
agtaacgacgagctcaggggcctgctggccctgccctcctccgcagggagccagtccagc
tctggaagccactcggggtcaggaactgaggacaagtcggacaaaggtttcgaatgcgtc
ttctgcaattttgtgtgcaagacgcgcagcatgtacgaacgccacctccagatccacctc
atcacgcggatgtttgagtgcgacgtctgccacaagttcctgaagacgcctgagcagctg
ctggagcacaagaagtgccacaccgtcccctccggagggctcaagtgccctttctgcatc
tactccaccaatcgtccggcggccatggagtgccacctgaagacgcaccgcaagatggag
taccgctgccgcatctgccagggactgtggccggaccaggcctcactggaggcccacgtg
cgcggccatcgcctgggcaaccactacaagtgtgagcggtgtggctacttgtccaagacg
gccaacaagctgatcgagcacgtgcgcgtgcacacgggcgagcggcccttccactgcgac
cgctgctcttacagctgcaagcgcaaggacaacctcaacctgcacaagaagctgaagcac
gccccgcgcccgactctcggctgccgagagtgccccttcaccaccacacacaccctcgtc
ttcagccgccacctcgagaagcaccggagcgcaggagcggggggtccggacggcggcgag
ggaggagaggaggaagaagaggaagaagaagaagaagcggaggtggaggacgacggggag
gaggccggagaggaggagaaggaggaggaggaggaggagccggcggcggcggcggcctct
tctttgaggacgagtggggagagcttcctgtttggcggagggggcgggagcagcagcaac
agcccgctcatgagtctcacggcgtcccgggcgctgcagtccgtcgccctgtcgctcacg
ctgggcacgccccgccggctggacgccgtcggcactaacggcaacaacaacaacaacaac
ggcggcaccgccagaggccccggcggcccctcctccctcttcccgccctcgccccgccac
atgttggagcagtccaggagctgcggccgggcacacctgatccccctcaccgccgcgttc
acccacagccgccgcttcacattccactcccggtggcggcccgccgcgccgcctcttctc
ttctcctccgacgcggcgtcgccctcccgctcttcctcctcctcctcaccctcctcccac
aaacactccttcctggcctacctgggactgacggagagggccaagactgtctga
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integrated database retrieval system
