Pseudoliparis swirei (Mariana hadal snailfish): 130191238
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Entry
130191238 CDS
T09868
Name
(RefSeq) calpain-2 catalytic subunit-like isoform X1
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04141
Protein processing in endoplasmic reticulum
pswi04210
Apoptosis
pswi04217
Necroptosis
pswi04218
Cellular senescence
pswi04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130191238
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
130191238
04217 Necroptosis
130191238
04218 Cellular senescence
130191238
09144 Cellular community - eukaryotes
04510 Focal adhesion
130191238
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130191238
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
130191238
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C2: calpain family
130191238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
130191238
NCBI-ProteinID:
XP_056266872
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MSGIAATLQHRRDRDRGIGSCSQAVKYLNQDFEALRRQCAESGRLFLDETFPAQGSSLGF
KELGPGSYKTRGVSWERPPELTSDPEFIVSGASRTDICQGALGDCWLLAAIASLTLNEEV
LARVVPHGQSFSRGEYAGIFHFQFWQFGEWLDVVIDDRLPVKDGELMFVHSAEGREFWSA
LLEKAYAKMNGCYEALSGGSTTEGFEDFTGGIAEAHDLSEPDPHLFHIIQKAQNRGSLMG
CSIDITSSSDSEAVTSQKLVKGHAYSVTGADQVEYRGNMEKLIRIRNPWGQVEWTGDWSD
DSTQWGQISDEDRDRLSHRSEDGEFWMSFNDFLRHYSRLEICNLTPDALSDDSVSKWALS
KFDGSWRRGSTAGGCRNFPDTFWTNPQFVIRLDEEDDDPDDGENGCSFVVGLIQKNRRRM
RKMGEDMQTMGFAIYEVPEESRGQRNVHLNRNFFLRNASAARSETFINLREVCSRFCLPP
GEYLIIPSTFEAHKNGDFCVRVFSEKQAEFQELDDPIESRVEQIEIDEDDVGDRFRGLFG
QLAGQDCEISTFELQKILNKVVTKRSDIKTNGFSISTCRNMINMLDEDGSGKLGLVEFKV
LWTKIEKYLKVYREKDVDNSGTMSCTEMRVAVEEAGFSLNNPLHQVLVARYSDPDLTVDF
DNFVSCVVRLENMFNTFNTLDRDDSGTVELSLMEWLNATLL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcatcgcggccacgctgcagcaccgccgggaccgggaccggggcatcggctcg
tgcagccaggcggtgaagtacctgaaccaggacttcgaggctctgcggcggcagtgcgcg
gagagcggccgcctcttcctggacgagacgttcccggcgcagggctcgtctctgggcttc
aaggagctgggccccggctcctacaagacccgcggggtgtcgtgggagaggcccccggag
ttgacctctgaccccgagttcatcgtctctggagcctccaggacggacatctgtcaggga
gctctgggtgactgctggctgctcgccgccatcgcctcgctgaccctgaacgaggaagtt
ctggctcgagtcgtcccacatggacaaagcttcagcagaggagagtacgctggcatcttc
cacttccagttctggcagttcggggagtggctggacgtcgtgatcgatgaccggctgccg
gtcaaagacggagagctgatgttcgtccactctgcggaggggagggagttctggagcgcc
ctgctggagaaggcctacgccaagatgaacggctgttacgaggctctgtctggagggtcc
accactgagggttttgaggacttcaccggaggaattgcagaggcccacgacctgagtgaa
ccggatccacatctgttccacatcatccagaaagctcagaaccgcggatccttgatgggc
tgctccatagacatcacaagctcatccgactccgaggccgtgacctctcagaagctggtg
aaaggccacgcctactctgtgacaggtgcagatcaggtggagtaccgcggcaacatggag
aagctgatccggatcaggaacccctggggtcaggtggagtggaccggagactggagcgat
gactcaacccagtggggtcagatcagcgacgaggaccgagaccgtctgagtcatcgctcg
gaggacggagagttctggatgtctttcaatgacttcctacgacattactcccggctggag
atctgtaacctgacgcccgacgccctgagcgacgactccgtgtccaagtgggctctgtcc
aagttcgatggcagctggaggagagggtccaccgccggaggctgcaggaactttcccgac
accttctggaccaaccctcagttcgtgatccggctggacgaggaggacgatgacccggac
gacggagagaacggctgcagcttcgtggtcggtctgatccagaagaaccgcagacgcatg
aggaagatgggtgaagacatgcagaccatgggattcgccatctacgaggttcccgaggag
tcccgcggtcagaggaacgtccacctgaaccggaacttcttcctgcggaacgcctccgcc
gctcgctccgaaaccttcatcaacctgcgagaggtgtgcagccgcttctgcctgccgccg
ggcgagtacctgatcatcccgtccaccttcgaggcgcacaagaacggagacttctgcgtc
cgcgtcttctccgagaagcaggccgagttccaagagctggacgaccccatcgagtccaga
gtggagcagatcgagatcgatgaagacgacgtgggcgatcggttcaggggtctgtttgga
cagctggccggacaggactgtgagatctccaccttcgagctgcagaagatcctcaacaag
gtggtgaccaaacgttctgacatcaagaccaacggcttcagcatctcaacgtgtcgcaac
atgatcaacatgctggacgaagacggcagcgggaagctgggtctggtggagttcaaagtg
ctgtggaccaaaatcgagaagtatctgaaagtgtaccgagagaaggacgtggacaactct
gggaccatgagctgcacggagatgagggtggccgtggaggaggccgggttcagcctcaac
aacccgctccaccaggtgctggtggctcgctacagcgacccagatctcacggtcgacttc
gacaactttgtgagctgcgtggtccgtctggagaacatgttcaacacgtttaacactctg
gaccgagacgactccggaactgttgagctcagcctgatggagtggctgaacgcaaccctg
ctctga
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