Pseudoliparis swirei (Mariana hadal snailfish): 130194336
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Entry
130194336 CDS
T09868
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130194336 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130194336 (rad54l)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
130194336 (rad54l)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Rad54_N
Zn_ribbon_InsA
Motif
Other DBs
NCBI-GeneID:
130194336
NCBI-ProteinID:
XP_056271278
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Position
5:13797808..13811475
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AA seq
740 aa
AA seq
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MRRSLAPSQVAKRKQPGDSCEDDDWTCRTEKKRNGDNKKLESPISPFRKPLTQLNKPSPC
LDGDKHEAFIRSILSKPFKIPIPNYTGSLGIRALGLKRAGVRKALHDPFAEDALVLYEPP
TLSAHDLIKAEKEKLPVHVVVDPVLGKVLRPHQREGVKFLWDCVMGRRISDSYGCIMADE
MGLGKTLQCIALMWTLLRQSPDVKPEIDKVIVVSPSSLVRNWYNEVGKWLGGRVTPVAID
GGSKDEIDRQLVNFMSQHGLRIPTPILIISYETFRLHAGVLHKGTVGLVICDEGHRLKNS
DNQTYQALNAMSAKRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKG
RDADASGKDRETGEGKLKELISIVNRCLIRRTSDILSKYLPVKIEHVVCCRLTPLQSALY
KHFLRQAKPIETLQEGKTNVSSLSSITSLKKLCNHPALIYEKCVENAEGFEGALDLFPPG
YCTKALEPQLSGKMLVLDYILAMTRTTSSDKVVLVSNYTQTLDLFEKLCRSRRYLYGRLD
GTMSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM
ARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELREL
FTLNEETTSDTHDRFRCRRCVNGREVRPPTDDSDCTSNLSQWNHCFDKKGLRDQVLKASW
DAAVSFVFHQRSHEDQKGVV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggagtcttgcacccagtcaggtggccaaacggaagcaaccaggggattcctgt
gaggatgatgactggacatgtagaaccgagaaaaaaagaaacggtgataataagaagcta
gagagccccatttctcccttcagaaagcctctgacacagctgaacaagccgtccccttgt
ctggatggtgacaaacatgaggcgtttattcgcagtatcctctccaagccatttaaaatc
cccattcctaattacacaggctcactgggaatcagggcactcggcctgaagcgtgcaggt
gtgaggaaagcgcttcacgatcccttcgcagaagacgctctggtcctttatgagcccccg
actctgagcgctcacgacctgatcaaagctgaaaaagaaaaactaccagtccatgttgtt
gtggatccagttttaggaaaagtgctcagaccccatcagagagagggggtgaagttcctg
tgggactgtgtgatgggaagacgcatctccgattcgtacggctgcatcatggccgatgag
atgggcctggggaagaccttacagtgcatcgccctcatgtggactctgctgcgccaaagc
ccggacgttaagccggagatagacaaggtcattgtggtttccccttccagtctggttcgc
aactggtacaatgaagtaggaaagtggctgggaggacgcgtgacaccagtggccattgac
ggaggttcaaaggatgagatcgacagacaactagtgaacttcatgtctcagcacggtttg
agaataccaaccccgatcctgatcatttcatatgagacatttcgactgcacgccggggtt
ctgcacaagggcacggtcggattggtcatctgtgacgagggccatcggctgaagaactct
gacaaccagacgtaccaggccctaaatgccatgagtgccaagaggagagtgctgatatcg
ggaacgcccatccagaacgacctgctggagtacttcagcctggtccactttgttaatgct
gggatccttggtacagcccaggagtttaagaagcggtttgagcttcccatcctcaaaggt
cgagatgcagatgctagtggtaaagacagagagacgggagagggaaaactcaaggagctg
atcagcatcgtcaacaggtgcttgataaggagaacatcagatatcttgtcaaaatatctt
cctgtgaaaatcgagcatgtcgtgtgttgcaggttgactcctctgcagtcggcgctctat
aagcacttcctgcggcaggcgaaacccatcgagacgttacaagagggaaaaacgaatgtc
tcctccctgtcctccatcacatcactcaagaaactgtgcaatcacccggctctcatctat
gagaagtgtgtggagaatgcagagggctttgagggggcgctggatctgttcccacccggt
tactgcactaaggctttggagcctcagctctctgggaaaatgctggttcttgactacatt
ctggcgatgacaaggacgacatctagtgacaaggtggtgcttgtctccaactacactcaa
acactggacctctttgaaaagctttgcagatctagaagatacctctatggtcgtctggat
ggcacaatgtccattaagaaaagagccaagattgtagaaagattcaacagtccatctagt
ccagagttcatcttcatgctgagcagcaaggctggtggatgtggcctgaatctgatcggt
gctaatcgcctcgtcatgtttgatccggactggaacccggccaatgacgagcaggcgatg
gcgcgtgtgtggagagacggccagaagaagacctgctacatctacaggctgctctctacc
gggacgatcgaggagaagatcctccagcggcaggcccacaagaaagccctgagcagctgt
gtggtggacgaggagcaggacgtggagcgccacttctccctcggagaactccgggaactc
ttcaccctcaacgaggagaccaccagcgacacgcatgaccggtttcgctgtcgccgctgt
gtgaacggcagggaggtccggcctcctacagacgactctgactgcaccagcaatctctcc
cagtggaaccactgcttcgacaagaagggtctgagggaccaagtgctgaaagcctcctgg
gacgctgccgtctcctttgtcttccaccagcgctcgcacgaggaccagaagggtgtcgtg
tag
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