Pseudoliparis swirei (Mariana hadal snailfish): 130197436
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Entry
130197436 CDS
T09868
Symbol
pals2b
Name
(RefSeq) MAGUK p55 subfamily member 6b isoform X1
KO
K28619
MAGUK p55 subfamily member 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130197436 (pals2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130197436 (pals2b)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
PDZ domain-containing proteins
MAGUK family proteins
130197436 (pals2b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27
PDZ
SH3_1
SH3_2
PDZ_2
PDZ_6
PDZ_Tricorn
SH3_9
Motif
Other DBs
NCBI-GeneID:
130197436
NCBI-ProteinID:
XP_056276115
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All DBs
Position
1:complement(12180088..12204417)
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AA seq
558 aa
AA seq
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MSNRDGRWTTATSHARFIAMQQVLDNLGELPTSTGAKDIELLFLRGIMESPTVCSLAKAH
KQLEEVKLEAVQDNNVELVTDILGDINNLTVKDNGAAELSRILKEPHFQSLLEAHDMVAS
KCYVVPPPTEMGNDAALNSALMQADAVRMIGIRKNAGEPLGVTFRVEKDDLVIARILHGG
MIDRQGLLHVGDIIKEVNGKDVGNNPTELQEMLKDCSGGITLKILPSYRDAPAPPQVYVR
PYFDYDPANDNLIPCREAGMAFKKGDILQIVNREDPNWWQACHVVAGATGLIPSQFLEEK
RKAFVPRDVDGSGILCGTIAGKKKKKMMYLTAKNAEFDRHELQIYEEVAKVPAFQRKTLV
LIGAQGVGRRSLKNRLMVLQPTRFGTTMPYTSRRPRDDELNGNSYHFTSRTEMEVDVKAG
RFLEHGEYDANLYGTKIESIHKVVGTGRTCILDVNPQALKVLKTAEFMPYVVFIAAPDFD
TLKAMHKAVVDAGITTKQLTDVDLRKTVDESARIQRAYSHYFDLTVVNDNLDKAFEALRA
DVDTLCSEPQWVPVNWVY
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccgggacggtcggtggacgaccgcgacctcacacgcacgattcatagccatg
cagcaggtgttagataatctgggggagctgcccacctccacgggcgccaaagacatcgag
ctgctcttcctgcgcggcatcatggaaagtcccactgtatgctccctggctaaggctcac
aaacagctggaggaggtgaagctggaggcggtgcaggacaacaatgtggagctagtgacg
gatattctgggggacatcaacaatctcacggtgaaagacaacggcgcggccgaactgtcc
aggatcctcaaggagccacacttccagtctcttttggaggcacatgacatggtggcttct
aagtgctacgtggtcccgcccccgactgagatgggcaatgatgcggcactgaacagcgct
ctgatgcaggcagatgctgtgcgcatgattggcatccggaagaacgccggagagccactg
ggcgtgacatttcgtgtggagaaagacgacctcgtcatcgctagaattcttcacggcggc
atgatcgacagacagggtctgctccacgtcggcgacattataaaggaagtgaacgggaag
gacgtcggcaacaaccccactgagctgcaggagatgctcaaagactgcagcggggggatc
acgctgaaaatactcccgagctaccgagacgctcccgcaccgccgcaggtgtacgtgcgc
ccgtactttgattacgacccggccaatgacaacctgatcccttgccgagaggccgggatg
gccttcaagaaaggcgacattcttcagatcgtcaacagagaggatcccaactggtggcag
gcgtgccatgtggtcgctggagcgacggggctgatacccagccagttcttggaagagaag
aggaaagctttcgtccctcgagacgttgatggatcagggatcctttgtgggaccatagct
ggaaaaaagaagaagaagatgatgtacctgacagccaagaatgcagagtttgacagacat
gagctgcagatctacgaggaagtggcaaaggtgccagcgttccagaggaagacgctggtt
ctgattggtgctcagggcgtgggccgacgcagcctgaagaatcggctgatggtcctccaa
cccactcgcttcggcaccacgatgccctacacttcccggcggccccgcgatgacgagctg
aacggcaattcctaccacttcacttcaaggacggagatggaggtggacgtgaaggccggc
cgcttcctggagcacggcgagtacgacgcgaacctgtacggcacgaagatcgagtccatc
cacaaggtggtgggcacgggacgcacctgcatcctggacgtcaacccacaggctctgaaa
gtactgaaaacagcggagttcatgccttatgtggtgttcattgcagcgccagattttgac
acgctcaaggccatgcacaaagctgtggtggacgcaggcatcaccacgaagcaactcacg
gatgtggacctgaggaagacggtggacgagagcgctcggatccagagggcttacagccac
tactttgacctgaccgtcgtcaacgacaacctggacaaggccttcgaggcgttacgtgcc
gacgtggacacgctgtgcagcgaaccccagtgggtcccggtgaactgggtttactga
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