Pseudoliparis swirei (Mariana hadal snailfish): 130199871
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Entry
130199871 CDS
T09868
Name
(RefSeq) troponin C, skeletal muscle
KO
K12042
troponin C, skeletal muscle
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04020
Calcium signaling pathway
pswi04814
Motor proteins
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130199871
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130199871
04820 Cytoskeleton in muscle cells
130199871
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130199871
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
130199871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_FSTL1
EF-hand_9
AIF-1
EH
SPARC_Ca_bdg
EF_EFCAB10_C
EF-hand_11
SPEF2_C
Motif
Other DBs
NCBI-GeneID:
130199871
NCBI-ProteinID:
XP_056279678
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All DBs
Position
9:complement(1579031..1589191)
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AA seq
161 aa
AA seq
DB search
MPTDAQSDARSFLTEEMISEFKAAFDMFDTDGGGDISTKELGQVMRMLGQNPSREELDAI
IEEVDEDGSGTIDFEEFLVMMVQQLKEDQAGKSEEELSECFRIFDKNGDGFVDREEFGEI
LHLTGEPVVEEDIDEMFGEGDTNKDGKIDFDEFLKMMENVQ
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccgacgcccaaagcgacgcccgctccttcctgacggaggagatgatttcagag
ttcaaggccgccttcgacatgttcgacacggacggcggtggcgacatcagcaccaaggag
ctgggccaggtgatgaggatgctgggccagaacccatccagggaggagctggacgccatc
attgaggaggtggatgaggacggcagcggcaccatcgacttcgaggagttcttggtgatg
atggtgcagcagctcaaggaggaccaggccggcaagagcgaggaagaactttcggaatgc
ttccggatcttcgacaagaacggagacggcttcgtggaccgggaggagttcggggagatc
ctccatctcaccggggagccggtagtggaggaggacatcgacgagatgttcggggaagga
gacaccaacaaagacgggaagatcgatttcgatgagttcctgaagatgatggagaacgtc
cagtag
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integrated database retrieval system
