Pseudoliparis swirei (Mariana hadal snailfish): 130204896
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Entry
130204896 CDS
T09868
Symbol
tln1
Name
(RefSeq) talin-1 isoform X1
KO
K06271
talin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04510
Focal adhesion
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130204896 (tln1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130204896 (tln1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130204896 (tln1)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130204896 (tln1)
Exosomal proteins of other cancer cells
130204896 (tln1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Talin_IBS2B
TLN1-like_RS
Talin_VBS2
Talin_R4
VBS
Talin_middle
FERM_f0
IRS
FERM_M
I_LWEQ
FERM_N
RA_2
Vinculin
PH_SLA1
TrcR
SNX17-31_F2_FERM
VBS_C3G9
DUF7783
Motif
Other DBs
NCBI-GeneID:
130204896
NCBI-ProteinID:
XP_056287859
LinkDB
All DBs
Position
15:1644464..1719766
Genome browser
AA seq
2294 aa
AA seq
DB search
MVALSLKIGVGSVVKTMQFEPSTMVYDACRIIRERVPEAQLGQPNDYGLFLSDEDPKKGI
WLEAGKALDYYMLRNGDNLEYKKKQRPLKIRMLDGTVKTVMVDDSKIVSDMLMTICARIG
ITNYDEYSLVRDLLEDKKEESTGTLRRDKTLLRDDKKMEKLKQKLHTDDELNWLDHGRTL
REQGVEETEMLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACDFAG
FQCQIQFGDHNETKHKPGFLDLKEFLPKEYIKHKGEKRIFQSHKNSQNMTEIEAKVSYVK
LARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVEEKTKEVIQEWNLTNIKRWA
ASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKKSKDHFGLEGDEESTML
EDSVSPKKSTVLQQQFNKVGRVETGSVALPAIMRSGAGGPESFQMGSMPQAKQHITSGQM
HRGHMPPLTSAQQALTGTINCSMQAVQAAQASLDDLDTLPPLGTDAASQAWRKNKMDESK
HEIHSQVDAITAGTASMVNLTAGDPAETDYTAVGCAVTTISSNLTEMSKGVKLLAALMED
EGANGQQLLGAAKNLACAVSNMLKTAQPANTEPRQILLQAAGNVGTASGELLSHIGETDT
DPQFQDMLMHLAKAVANAAAALVLKAKNVAQKTEDSTQQNRVIAAATQCALSTSQLVACT
RVVAPTISSPVCQEQLIEASKLVAKSVEGCVEASQGATGDEGLLKQVGVAATGVTQALNE
LLQHIKQYARGGHPIGRHGEATDRILDVTENIFSSMGDAGEMVRQARILAQATSDLVNAI
KMDAEGESDLENSRKLLSAAKLLADATAKMVEAAKGAAANPDSEEQQQKLREAAEGLRMA
TNAAAQNAIKKRLVNKLENAAKQAAAAATQTIAAAQHAASSNRNQAAQQQLVQSCKVVAE
QIPQLVQGVRGSQSQPDSPSAQLALISASQNFLQPGAKMVASSKATVPNIGDQASAMQLS
QCAKNLASALAELRATSQKAQEACGPLEIDNALSTVRDLEKDIQEAKASAEEGKLKPLPG
ETLERCSQDLGTSTKAVSAAMAQLLSEATQGNENYTGMAARDVAQALRSLASAARGVAAT
TADRAARNALLDCAADVMDKSGNLIEETKRAIAKPGDAENQQRLVQVAKAVSQALNRCVN
CLPGQRDVDNAIRSVGEASKTLLSDSFPSSGRSFQEVQAQLNEVAAGLNQSANEVVQASR
GTTQDLARATSKFGQDFSNFLDAGVDMAGTSQSKEDQTQVVSNLKTISMSSSKLLLAAKA
LSTDPSSPNLKNQLAAAARAVTDSINQLITMCTRQAPGQKECDNALRELESVRGMLENPT
EAINDLSYFDCIDSVMENSKVLGESMAGISHNAKNSNLPEFGDSVSSGSKALCGLTEAAA
QAAYLVGVSDPNSSAGQKGLVDPSQFARANQSIQMACQNLVDPACTQSQVLSAATIVAKH
TSALCNACRLASSRTPNPVAKRQFVQSAKEVANTTANLVKSIKALDGAFNQENREKCKAA
TGPLIEAVDNLTAFASNPEFASIPAQISPEGHAAMAPIVVAAKTMLESSTGLIQTARSLA
VNPKDPPKWSVLAGHSRTVSDSIKKLITNMREKAPGQRECDDAIEVLNGCIREVDQASLA
AISQQLTPREDISMETLHQQMAASVHEISNLIDPVAVAAGCEASLLGHKVSQMASYFEPL
IMAAIGTASKIVSSQQQMAVLDQTKTLTESALQMLYTAKEAGGNPKAAHMQEALEESVQM
MKEAVDDLGATLAEAASAAGAVGGMVESINDSINKMEDTYCLEPEGTFVDYQTTMVRTAK
AIAITVQEMVTKSNTNPDDLGGLANHLTNEFGNLANEAKYAAVTAENDEIGSHIKKQVGE
LGFSCTGLVTKAGALQCSPNDSFTKKELIESARKVSEKVSHVLASLQAGNRGTQACITAA
SAVSGIIADLDTTIMFASAGSLNRENAETFADHREYILKTAKALVEDTKLLVSGAGASQE
RLAQAAQSSVFTITKLADVVKLGAASLGSEDPETQVVLINAVKDVAKALGNLISATKGAA
GKPHDDPSMLQLKNCAKVMVTNVTSLLKTVKAVEDEATKGTRGLEATIEHIKQELTVFNS
SEPPPSTTTPEEFIRMTKGITMATAKAVAAGNSCRQEDIIATANLSRRAIADMLHSCKQA
AYHPEVSKEVQTRALRFGNECACGYLGLLEHVLVIIQKPSHELKQQLANYSKRVAGSVTE
LIQAAEAMKGIVTF
NT seq
6885 nt
NT seq
+upstream
nt +downstream
nt
atggtggccctgtccttaaagatcggcgtgggcagcgtggtgaagacgatgcagttcgag
ccgtccaccatggtgtacgacgcctgccgcatcatcagggagcgggttcccgaggcgcag
ctcggacagcccaatgactacgggctgttcctgtccgatgaagacccaaagaaaggcatc
tggctggaggcaggcaaggcgctggactactacatgctgaggaatggggacaatctggag
tacaagaagaagcagcggcctctgaagatccgcatgctggacggcacggtgaagaccgtc
atggtggacgactccaagatcgtcagcgacatgctgatgaccatctgcgctcggataggc
atcaccaactacgacgagtactcgctggtcagggacctcctggaggacaagaaggaggag
agcaccgggacgctgaggagggacaagacgctgctgagggacgacaagaagatggagaag
ctgaagcagaagctgcacacggacgacgagctgaactggctggaccacggccggacgttg
agggagcagggcgtggaggagacggagatgctgctgctgaggaggaagttcttctactcg
gaccagaacgtggactccagagacccggtccagctcaacctgctctacgtacaggcccgt
gacgacatcctcaacgggtcccaccccgtctccttcgataaggcctgtgacttcgctggt
tttcagtgtcagatccagttcggcgatcacaacgagaccaaacacaagcccggcttcctg
gatctgaaggagttcctgcccaaagagtacatcaagcacaaaggagagaagaggatcttc
cagtcgcacaaaaacagccagaacatgacggagatcgaggccaaggtcagctacgtgaag
ctggcccggtccctgaagacctacggggtctccttcttcctggtcaaggagaaaatgaag
ggcaagaacaagctggtgccgcggctgctgggcatcaccaaggagtgcgtgatgagggtg
gaggagaagaccaaggaggtgatccaggagtggaacctcaccaacatcaagcgctgggcc
gcctcccccaagagcttcaccctggacttcggggactaccaggacgggtactactcggtc
cagaccaccgagggcgagcagatcgctcagctcatcgccggctacatcgacatcatcctg
aagaagaaaaaaagcaaagaccacttcgggctggagggagacgaggagtccaccatgctg
gaggactctgtgtcccccaagaagtccacggtgctgcagcagcagttcaacaaggtgggc
cgggtggagacgggctccgtggcgctgccggccatcatgcgctcgggggccggcgggccg
gagagcttccagatgggctccatgccgcaggccaagcagcacatcaccagcggacagatg
caccgcggacacatgccgcctctgacttcagcccagcaggcgctgaccgggaccatcaac
tgcagcatgcaggcggtgcaggcggcccaggcctcgctggacgacctcgacacgctgccc
ccgctgggcaccgacgctgcgtctcaagcttggcgtaaaaacaagatggacgagtccaaa
cacgagatccactcccaggtggacgccatcacagcgggcaccgcctccatggtcaacctc
actgcaggcgacccggcggagacggactacacggcggtgggctgcgccgtcaccaccatc
tcctccaacctgacggagatgtcgaagggcgtgaagctgctggcggcgctcatggaggac
gagggcgccaacgggcagcagctgctgggcgccgccaagaacctggcgtgtgccgtgtcc
aacatgctgaagaccgcgcagcccgccaacaccgagccgcgtcagatcctgctgcaggcg
gccggcaacgtgggcacggccagcggcgagctgctgtcccacatcggggagacggacacc
gacccgcagttccaggacatgctgatgcacctggcgaaggccgtggcgaacgccgccgcc
gccctggtgctcaaggccaagaacgtggcccagaagacggaggactcgacccagcagaac
cgggtcatcgccgcggccacgcagtgcgccctgtccacgtctcagctggtcgcctgcacc
cgggtggtggcgccgaccatcagctccccggtgtgccaggagcagctgatcgaagccagc
aagctggtggccaagtcggtggagggctgcgtggaggcgtcgcagggcgccaccggcgac
gagggcctcctgaagcaggtgggcgtggccgccacgggcgtcacgcaggcgctcaacgag
ctgctgcagcacatcaagcagtacgccagaggggggcaccccatcgggcgccacggcgag
gccacggaccgcatcctggacgtcaccgagaacatcttcagctccatgggcgacgccggt
gagatggtgcgccaggcccggatcctcgcccaggccacgtccgatctggtcaacgccatc
aagatggacgccgagggcgagtcggacctggagaactcgcgcaagctgctgtcggccgcc
aagctgctggcggacgccaccgccaagatggtggaggccgccaagggtgcagcggcgaac
cccgacagcgaggagcagcagcagaagttgcgagaggccgccgagggtctccgcatggcc
accaacgccgccgcccagaacgccatcaagaaacgtctggtcaacaaactggagaatgca
gccaagcaagcggcagcggccgccactcagaccatcgccgccgcccagcacgccgcctcg
tccaataggaaccaggcggcccagcagcagctggtgcagagctgcaaggtggtggcggag
cagatccctcagctggtccagggggtccgaggcagccagtctcagcccgacagccccagt
gctcagctggccctcatcagcgccagccagaacttcctgcagcctggtgctaagatggtg
gcctcctctaaagccacggtccctaacatcggggaccaggcctcagccatgcagctcagc
caatgtgccaagaacctggccagcgccctggctgagctccgggccacatcccagaaggct
caggaggcgtgcggcccgctggagatcgacaacgctctgtccacggtgagggatctggag
aaggacatccaggaagccaaggcgtcggccgaggagggcaaactgaagccgctgcccgga
gagacgctggagagatgctcccaggatctgggcaccagcacgaaggccgtgagcgccgcc
atggctcagctgctgagtgaggccacgcagggcaacgagaactacacgggcatggcggcc
agagacgtggctcaggctctgaggtcgttggcctcggccgccagaggagtcgccgccacc
acggccgaccgggcggcgcgcaacgcgctgctggactgcgccgcggacgtcatggacaag
tccggcaacctgatcgaggagaccaagagggccatcgccaagccgggggacgccgagaac
cagcagcggctggtccaggtggccaaggccgtgtctcaggccctcaacaggtgtgtgaac
tgcctccccggccagagagacgtggacaacgccatccgctccgtgggcgaggccagcaag
accctgctgtccgactccttcccgtccagtgggaggagcttccaggaggtccaggctcag
ctcaacgaggtggctgccggtctcaaccagtccgccaacgaggtggtccaggcgtccagg
gggacgacccaggacctggccagggccaccagcaagttcggacaggacttcagcaacttc
ctggacgccggagtcgacatggccggaacatctcagtctaaagaggaccagacgcaggtg
gtctccaacctgaagaccatctccatgtcctccagcaagctgctgctggcagccaaagcc
ctgtccaccgaccccagctcccccaacctcaagaaccagctggcagccgccgccagggcc
gtgacggacagcatcaaccagctcatcaccatgtgcacccggcaggctcccgggcagaag
gagtgtgacaatgctctcagagagctggagtcggtgagggggatgctggagaacccgacg
gaggccatcaacgacctgtcgtacttcgactgcatcgacagcgtcatggagaactcaaag
gtcctgggtgagtccatggctggcatttcacacaacgccaagaactccaacctgccggag
ttcggcgactcggtcagcagcggctccaaagctctgtgtggtctgacggaggcagctgct
caggccgcctacctggtgggggtctcggaccccaacagctcggcgggccagaagggcctg
gtggacccctcccagttcgcccgggccaaccagtccatccagatggcctgccagaacctg
gtggacccggcctgcacccagtcccaggtgctctctgccgccaccatcgtggccaagcac
acgtcggcgctctgcaacgcgtgccgcctggcctcctccaggacgcccaacccggtggcc
aagcggcagttcgtccagtcggccaaggaggtggccaacaccaccgccaacctcgtcaag
tccatcaaggctctggacggagccttcaaccaggagaacagggaaaagtgtaaggccgcc
accgggccgctgatcgaggccgtggacaacctcacggccttcgcctccaaccccgagttc
gccagcatccctgctcagatcagccccgagggccacgcagccatggcgcccatcgtggtg
gcagccaagacgatgctggagagctccaccgggctgatccagacggcccgctccctggcc
gtcaaccccaaagacccccccaagtggtcggtgctggcgggtcactccagaaccgtgtcc
gactccatcaagaagctcatcaccaacatgagggagaaggccccgggccagagggaatgt
gacgacgccatcgaggttctgaacggctgcatccgggaggtggaccaggcgtcgctggcc
gccatcagccagcagctcacaccccgagaagacatctccatggagacgctccatcagcag
atggccgcctcggtccacgagatcagtaacctgattgacccggtggcggtggccgccggc
tgcgaggcgtccctgctgggccacaaggtgtctcagatggccagctactttgagccgctc
atcatggccgccatcggcacagcgtccaagatcgtgagcagccagcagcagatggcggtc
ctggaccagaccaagaccctcacggagtcggccctgcagatgctctacaccgccaaggag
gccggagggaaccccaaggcggctcacatgcaggaggctctggaggagtcggtgcagatg
atgaaggaggccgtggacgacctgggcgccactctcgcggaggcggccagcgcggcgggc
gccgtgggcggcatggtggagtccatcaacgactccatcaacaagatggaagacacgtat
tgtctggagcctgaaggcaccttcgtggactaccagaccaccatggtcaggaccgccaag
gccatcgccatcacggtgcaggagatggtgaccaagtctaacaccaaccccgatgacctc
ggcggattggccaaccatctcaccaacgagtttggaaatctggccaacgaggccaaatat
gcagccgtgacggccgagaacgacgagatcggctcccacatcaagaagcaggtgggcgag
ctgggcttcagctgcacgggcctggtgaccaaagccggagcgctgcagtgcagccccaac
gactcgttcaccaagaaggagctgatcgagagcgcccgcaaggtctccgagaaggtgtcc
cacgtgctggcgtccctgcaggccggtaaccgtggcacccaggcctgcatcacggcggcc
agcgccgtgtccgggatcatcgccgacctggacaccaccatcatgttcgccagcgccggc
tcgctgaaccgcgagaacgccgagaccttcgccgaccacagagagtacatcctgaagacg
gccaaggctctggtggaggacaccaagctgctggtgtctggagccggagccagccaggag
aggctggcccaggcggcccagtcctccgtgttcaccatcaccaaactggccgacgtggtg
aaactgggagccgccagtctgggttctgaagacccagagacacaggtggtcctgattaac
gccgtgaaggacgtggccaaagctctggggaacctcatcagcgccaccaagggggccgcg
gggaaacctcacgacgaccccagcatgctgcagctgaagaactgcgccaaggtgatggtg
accaacgtgacgtccctcctgaagacggtgaaggcggtggaggatgaggccacgaagggg
acccgaggtctggaggccaccatcgaacacatcaagcaggagctgacggtgttcaacagc
tccgagccgccgccgtcgacgaccacgccggaggagttcattcgcatgactaaaggcatc
accatggcgacggcgaaagcagtggctgctgggaattcttgtcgccaggaggacatcatc
gccacggcgaacctgagccggagggccatcgccgacatgctgcactcctgcaagcaagcc
gcctaccaccccgaggtcagcaaggaggtccagaccagagctctgcgctttgggaacgag
tgtgcctgtggatacctgggcctgctggagcacgtgctggtgatcatccagaagccgtcc
catgagctgaagcagcagctggccaactactccaagcgggtggccggctccgtcacggag
ctcatccaggccgccgaggccatgaaaggtatcgtgaccttttga
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integrated database retrieval system
