Pseudoliparis swirei (Mariana hadal snailfish): 130208281
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Entry
130208281 CDS
T09868
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00450
Selenocompound metabolism
pswi00970
Aminoacyl-tRNA biosynthesis
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
130208281 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130208281 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pswi01007
]
130208281 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pswi03016
]
130208281 (mars1)
Enzymes [BR:
pswi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
130208281 (mars1)
Amino acid related enzymes [BR:
pswi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
130208281 (mars1)
Transfer RNA biogenesis [BR:
pswi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
130208281 (mars1)
Prokaryotic type
Other AARSs
130208281 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_3
GST_C_2
GST_C
GST_N_2
GST_N_3
Motif
Other DBs
NCBI-GeneID:
130208281
NCBI-ProteinID:
XP_056293291
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All DBs
Position
18:10444957..10464729
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AA seq
923 aa
AA seq
DB search
MKLFVSEGNPHCLKVLAALEVTGVHCDVQYVNHEERVVPFLSRPALPALLLPGGLHLFSP
NAICRYLFEVSGQDASELCNQWLEWEATDLQPPLLQGLHMAVLQGKGSEVSTVLQGPLDY
MEQSLSEGNTPYLTGEAVSVADVVLWAALYPILSDPSLALGERMSVKAWFDRGVVMHSCQ
SAAQKVLQGKGLQGMKIFMQRQPAPPSRQCRDRQPCNSNPAEGEESERVVSVEEMEAAAL
TWSKGLTDGPLATDRQHPILPEEGKRNLLVTSALPYVNNVPHLGNIIGCVLSADTFCRYG
RLRGWNILYVCGTDEYGTATENKAREEGLTPQQICDKYHAIHSNIYKWFQIDFDFFGRTT
TEKQTEIAQNIFWRLHKHGFLLEDTVEQLRCESCKRFLADRFVEGICPNCSYPEARGDQC
DKCGRLINAVELREPQCKVCRRTPAVQSSKHLFLDLPKLEAQLEQWLDKSISTGDWTANA
KQITRSWLRDGLKPRCITRDLKWGTPVPHPDFKEKVFYVWFDAPIGYLSITANYTDQWEK
WWKNPNQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLIATEYLNYEDTKFSKSR
GVGVFGDMAKDAGISADVWRFYLLYVRPETQDSAFSWADMALKNNSELLNNLGNFINRGG
MFVTKFFEGIVPVMELQPEDKTLLALVGWELQQYIQLLDKVKIRDALRHILNISRHGNQY
IQVNEPWKKIKGGDTERQRAGTVTGVSVNIACLLSVMLLPYMPAVSQTIRDQLNAPPSCV
NTMLQGTGTFVCCLSAGHRIGTVSPLFQKLEVDQIEALKKRFGGQQPEDEPPKKKTTAQS
ASSTQPAAVPAAVASVNGVDPERTKQLTQAVTEQGENVRVLKTQKAEKAAITAEVAKLLD
LKKQLAGAEGKSPEPAPQKDKKR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttcgtcagtgaaggcaacccgcactgcctcaaggtgttagctgctctagaa
gtgaccggagttcattgtgacgtccagtatgtcaaccacgaagagagagtggtgcccttc
cttagccgtccagccttgccagccctgctcctgcccggtggtctgcacctttttagccct
aatgccatctgccgatacctgtttgaagtaagtggacaagacgccagtgagctttgtaat
cagtggcttgaatgggaggccacagatcttcagcctccactgctacagggccttcacatg
gcagtgctgcaggggaaaggatccgaggtgtccacggtcctccaaggacccctagactac
atggagcagagcttgagcgaggggaacacgccatatttaactggggaagctgtttcagtg
gccgatgttgttttgtgggctgcgctctaccccattttatctgacccttcactagcattg
ggcgagcgcatgtctgtgaaggcttggtttgaccgcggggttgtcatgcacagttgccag
tctgctgctcagaaagtgctgcaggggaaaggcctgcagggcatgaagatcttcatgcag
aggcagcctgcacctccgagcaggcagtgcagagacaggcagccatgcaacagcaaccct
gctgagggtgaggaaagtgagcgtgtggtgtccgtagaggagatggaggcagctgctcta
acctggagcaaaggtttgaccgacggtcctttggctacagacagacagcaccccattttg
ccagaggagggcaagcgaaacctcctcgtgaccagtgccttgccgtacgtcaacaacgtc
ccccacctgggcaacatcattggctgcgtcctcagcgctgataccttctgcaggtatggc
cgtctgcgaggctggaacatcctgtatgtatgtggcacagacgagtatggcacagctaca
gagaacaaggccagagaggagggtctgacaccgcagcagatctgcgacaagtaccacgcc
attcactctaacatctacaagtggttccagatcgacttcgacttttttggcagaaccaca
accgaaaagcagactgagattgcccaaaatattttctggcgacttcacaagcatggtttc
ctcctggaagacacggtggagcaactgcgttgtgaaagctgcaagcgcttcctcgccgac
cgcttcgtagagggcatctgtcccaactgcagctacccagaagctcgtggtgaccagtgt
gacaagtgcgggcggctcatcaatgctgtggagctgagggaaccccagtgtaaagtctgc
aggcggactccagctgtacagtcctccaaacatcttttcctggacctgccaaagctagag
gctcagttggagcagtggctggacaagtcaatcagcaccggagactggaccgcaaatgcc
aaacagatcactcgctcctggctgcgtgatggactcaaacctcgctgcatcaccagggac
ctgaagtggggaacgccagtaccgcatcctgactttaaagagaaggtgttctacgtgtgg
tttgacgctcccattggttatctgtccattactgccaactacaccgaccaatgggagaag
tggtggaagaatcctaatcaggtggagctgtacaacttcatggccaaagacaatgtgcct
ttccacagtgtggtgtttccatgctctcttctgggagcgcaggacaactacactctggtc
aaccacctcattgccactgagtatctgaattacgaggatacaaagttctccaagagccgt
ggtgtgggtgtgtttggagacatggccaaggacgcgggcatctctgcagatgtgtggcgg
ttctacctcctctatgtgcgtccagagacacaggactcagccttctcctgggccgacatg
gctctgaagaacaactctgagctgctcaacaacttgggaaacttcatcaacagaggtggc
atgtttgtcacgaagttctttgagggcattgtgcctgtgatggagctacagccggaagat
aagacgctcctggctctggtgggctgggagctgcagcagtacatccagctgttggacaaa
gtcaaaatccgcgatgctctgagacacatcctcaacatctctcgccatggcaaccagtac
attcaggtcaatgaaccctggaagaagattaagggaggagacacagagaggcagcgtgcg
ggcacggtcaccggggtgtctgtgaatatcgcctgcttgctgtcagtgatgctgctgccg
tacatgccagctgtcagccagaccatcagggatcaactcaatgcccctccatcctgcgtc
aataccatgttgcaaggcactggcacctttgtgtgttgcctgagtgccggccaccgcatt
ggcactgtcagtccgttgtttcagaaactggaggtggaccagattgaggcgttgaagaag
agatttggcggacagcagcctgaagatgaaccacctaaaaaaaagacgacagctcagagc
gccagcagcacccagccggccgctgtgccagctgccgtggcgtcggtgaacggagtggac
ccagaaagaaccaagcagctcacacaggctgtgactgagcagggggaaaatgtgcgagta
ctcaaaacccaaaaggcggagaaggctgccatcacagccgaggtggccaaactgttggac
cttaagaaacagctggctggggctgaggggaaaagccctgagcccgcacctcagaaagac
aagaagaggtga
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