Pseudoliparis swirei (Mariana hadal snailfish): 130208497
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Entry
130208497 CDS
T09868
Symbol
prph
Name
(RefSeq) peripherin
KO
K07607
peripherin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130208497 (prph)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
130208497 (prph)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
CCDC39
Baculo_PEP_C
ATG16
Laminin_II
FKBP15
CENP-F_leu_zip
TPR_MLP1_2
KIF21A_4th
T9SS_plug_1st
CENP-H
PI3K_P85_iSH2
PI_PP_I
Motif
Other DBs
NCBI-GeneID:
130208497
NCBI-ProteinID:
XP_056293643
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All DBs
Position
18:complement(17765238..17771043)
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AA seq
470 aa
AA seq
DB search
MSHSSMHTSTSYRRTFGSPHPISMSSYSPVSSRTSVSGGRYMRSMPPGAASRSTSYHQQR
SRSAAQHPRLSYDKVDFTLSEAINQEFLTTRNNEKAELQELNDRFASFIEKVRYLETQNG
ALQQELNQFKGQHQHGQPNRASELFQEEVRDLRRQLDATEKERDQYQLERENLAEDLGLL
KQRLDEEAQKRADAENNLVAFRKDVDDATLSRLELERKIESLMDEIEFLKKLHDEEIQDV
QVSIQTQQLKLEVESTVRPDLTGALRDIRAQYETIASKNMQETEDWHKSKFNDLTESAKR
NTDALRQAKQEANESRRQMQSLNCEVDALKNTNESLMRQMREMEDQFSNEIGNYQDNVGR
LEDEMCHLKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITIPILNLGMRSHH
GDQDYDHTPSSMGKRTVLIKTVETRDGEVVKESKREKDRESARTDKDDDE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagccactcttcaatgcatacctcaacttcctacaggcgcacctttggaagcccacac
cctatctccatgtcctcttactctcccgtgtcctcccgtacgtcagtttctggagggcgc
tacatgcgttcaatgccacctggggctgcatcccgctccacctcctaccaccaacagcgc
tctcgctctgccgcccagcaccctcgcctctcctacgacaaggtggacttcaccttgtct
gaagccatcaaccaggagttcctaaccacccgcaacaacgagaaggccgagctgcaggag
ctcaacgaccgctttgccagcttcatcgagaaggtgcggtacctggagacgcagaatggt
gcactgcagcaagagctcaaccagttcaaaggccagcatcagcacggtcagcccaaccgc
gcctctgagctcttccaggaagaggtgagggacctgcgccgccaactggacgccaccgaa
aaggagagggaccagtaccaactggagagggagaacctggctgaggacctgggtctgctc
aagcaaaggttggatgaagaagcccagaagagggcagatgctgaaaacaacctggttgct
ttccgcaaggatgtggatgatgccacgttgtctcgtttggagctggagaggaagattgag
tctctgatggatgagattgaattccttaagaagctccatgatgaagaaatccaggacgta
caagtgagtatccagacccagcagctgaagctggaggtcgagagcacagtcaggcctgac
ctgactggagctctgagggacatcagggcccagtatgagaccattgcttcaaagaacatg
caggaaacggaggactggcacaagtccaagtttaatgatttgactgagtctgcaaagcgc
aacactgatgctctgaggcaggccaagcaggaggccaatgagtccaggaggcagatgcag
tccctcaactgtgaagttgatgcactgaagaacacaaatgaaagtctgatgaggcagatg
cgtgaaatggaggaccagtttagcaatgagatcggcaactaccaggacaacgtaggcaga
ctggaggatgagatgtgccacctgaaggaagagatggctcgccaccttcgggagtaccag
gacctcctcaatgtcaaaatggctctggacattgagattgctacttaccgtaaactactg
gagggggaggagagcaggattactattcccatcctcaatcttggcatgagaagtcaccat
ggtgatcaagactatgaccacactccaagcagcatgggcaagaggactgtgctgatcaag
actgttgagactagagatggagaggtggtgaaggaatccaagagggagaaggacagggag
tcagctcgcaccgacaaggatgatgacgagtag
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