Pseudoliparis swirei (Mariana hadal snailfish): 130210460
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Entry
130210460 CDS
T09868
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130210460 (smc4)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
130210460 (smc4)
Condensin II
130210460 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
NDC80_loop
HIP1_clath_bdg
TPR_MLP1_2
Crescentin
Motif
Other DBs
NCBI-GeneID:
130210460
NCBI-ProteinID:
XP_056296761
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All DBs
Position
20:20366285..20385359
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AA seq
1289 aa
AA seq
DB search
MPSKTAKGSTAKPKEKGSQPRDDSGDELDEPPQETNSNGQEEAPPKTDAVVDNRSLEEIL
GSIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNV
IDSMLFVFGYRAQKIRSKKLSVLIHSSDKHKDVQSCTVEVHFQKIIDKEGDDYEVIPNSK
FYVSRTANKDNSSSYYINGNKAKFKEVGALLRSHGIDLDHNRFLILQGEVEQIAMMKPKG
HTEHDEGMLEYLEDIIGCCRLKEPILNMARRIELLNEQRGEKLNRVKHVEKEKNSLEGER
NKAVEFLTLENDIFKHKSRLCQYYVQDLQKRVVDKEQEKQKILEDTKELTEKTAKISQET
EKMNQEIRDVEKKQNKLNKYIEAQKEKFTQLDLQDVEVREKIKHSKSKSKKLQKQLEKDK
EKLEEVRGVPASSEKAISEATACKEELEKQKVKQEKKLEEVMESLKEETSGLQQDKETKE
KELMELSKAVNETRSRTDLAQSELDIYLSRHNTALTQLNTAKQTLQTTSDTLRERRAAIK
DLEVKIPQNAQELKKDEGALEQLTKTDSETREVVREMRQKVDEAKSSRSSNRSRGRVLDA
LMQQKTSGRIPGIFGRLGDLGAIDEMYDVAISSCCGALDNIVVDTIDTAQKCVMFLKEQN
VGFATFIGLDKMTVWESNMAPIRTPENSPRLFDMVRVKDEGLRPVFYFALRDTLVAQDME
QATRMAFQKDRRWRVVTLKGQIIEMAGTMTGGGRAMKGRMGSSIGPEVSQEELDRMESTL
NEKVSKLQDYQQKKLQLEENVQGLRPQLRDMKNTLEKYANSLTSLADQEAHLKRQIKELE
ANVLAAAPDKAKQKQKEESLNEFKKDYDAASSRAGKVEDEVKRLHNLIVDINSHKLKAQQ
DKLDKVNKELDDCSSAITKANVAIKTADRNLKKCEESVGRVQTEQEENEKAMAELTEQLK
KLEDEAGEVMKACQEAEAALPEVQEQYQGVLKEIKVLRQQEHAMQEESLGVRLRIEQIET
TLAEHNNKIKHWQKEATKLSLHSIDGEPAEQLPVLTAADLEEISNPNIIINKMITLETKS
SQMKPNLGAIAEYKKKEELYLQRVAQLDEITTERDQFKRGYEDLRKQRLNEFMTGFNMIT
NKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLAL
VFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMFEIADRLI
GIYKTHNTTKSVGINPKTIVFKEHGAVTA
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaaaactgcaaagggctcaaccgccaagcccaaagagaaagggtcgcagccc
cgggatgactccggggacgagctggatgaacccccccaagaaaccaactccaatggccaa
gaggaggcaccgccgaaaactgatgcagtggttgataatcgaagtttggaggagattctc
ggtagcatccctccacccccgcccccagcaatgaccaatgagcccggtgctcctcgtctg
atgataacacatttagtcaatcgcaattttaaatcgtatgcaggcgagcagattctgggg
cctttccacaagcgcttttcatgcatcattggtccaaatgggagtgggaagtccaatgtg
atagattcaatgctctttgtgtttggataccgagctcaaaagatcagatccaaaaagctc
tcggtgctgattcacagctctgataaacataaggatgtgcaaagctgtactgtggaggtg
cattttcaaaagattattgataaggaaggagatgactacgaagtcatcccaaacagcaag
ttctacgtttccaggactgcaaacaaggataattcttcatcctactatatcaatggcaat
aaagccaaattcaaagaagtgggggctttactccgaagccatggcattgacctcgaccac
aacagatttctgatcttacagggcgaggtggagcagattgccatgatgaagcccaaaggt
cacacggagcatgacgagggcatgctggagtacctggaggacatcatcggctgctgccgc
ctcaaggagccgatcctcaacatggcgcgccgcatcgagctcctcaatgagcagcggggc
gagaagctaaaccgagtaaagcatgtggaaaaggagaagaattctttggagggcgaaagg
aacaaagctgtggagttcctcaccctggaaaatgacatcttcaaacacaagagtcgactc
tgccaatattatgttcaggatctgcagaagcgtgttgtcgataaagagcaggagaagcag
aagatcttggaggacaccaaagaactcactgagaaaactgccaagatatcacaagagacg
gagaaaatgaaccaagagatcagagatgtggagaaaaaacaaaataagctcaacaagtac
atcgaggcccagaaggagaagttcacccagctggacctgcaggacgtagaagtgcgagag
aagattaagcattccaagagcaagagcaagaaactgcagaagcagctggaaaaggacaaa
gagaagctggaggaggtgcgcggcgtgccagccagcagtgagaaggccatctctgaggcg
acagcttgcaaggaagagctggagaagcagaaggtgaagcaggagaagaagcttgaggag
gtgatggagagtctgaaggaagagaccagcggcttgcagcaggacaaagagaccaaagag
aaggagctgatggagctcagcaaggccgtgaacgagacccggtctcgtacggacttggct
cagtcggagctggacatctacctgagccgccacaacacggctctgacgcagctcaacacg
gccaagcagacgcttcagacgacgtccgacacgctgcgtgagcgccgcgcggccatcaaa
gacctggaagtcaaaataccccagaatgcacaggagctcaaaaaggatgaaggagccctg
gagcagctgacgaagacggacagtgagactcgggaagtggtgagggaaatgaggcagaag
gtggatgaagccaaaagctctcggtcctccaaccgcagtcgaggaagggtcctggacgcc
ctcatgcagcagaagacgagtggcagaatcccgggcatctttggaagattgggagacctt
ggagccatcgatgagatgtatgacgtggccatttcctcttgttgtggcgccctggacaac
atcgtcgtggataccattgacacagcccagaaatgtgtcatgttcctcaaagagcaaaac
gttggcttcgccaccttcattggtcttgacaagatgacggtgtgggagagtaacatggct
cccattcgcactccagagaacagccctcgtctcttcgacatggtgcgtgtgaaggatgag
ggcttgcgaccagttttctactttgccctaagggacacgttggtggcccaggacatggag
caggccacaaggatggccttccaaaaagacaggcgctggagagtggtcaccctgaagggt
cagatcatcgagatggccggaaccatgactggaggaggaagagcaatgaagggcagaatg
ggctcctcgattggtcccgaggtctcccaggaggagcttgaccgtatggagagcacgctg
aatgagaaagtgtcgaagctgcaggactaccagcagaagaagttgcagctggaagagaat
gtccagggcctgcggccacagctccgggatatgaagaacaccctggaaaaatacgccaac
agcttgaccagtctcgctgatcaggaggctcacttgaagcgtcagatcaaggagctcgag
gccaacgtgctggcggcggcccccgacaaggccaagcagaaacagaaggaggagagtctg
aatgaattcaagaaagactatgacgccgcctccagccgggcggggaaggtggaggatgag
gtgaagcggctccacaacctgatcgtcgacatcaacagccacaagctaaaggctcagcag
gacaagctcgataaggtcaacaaggagctggacgactgctcctccgccataaccaaggcc
aacgtggccataaagacggccgaccgcaacctgaagaagtgtgaggagagcgtgggccgt
gtgcagacggagcaggaggagaacgagaaggccatggcggagctcaccgagcaactgaag
aaactggaagatgaggccggggaggtcatgaaggcctgtcaggaggctgaggccgcgctg
cctgaggtgcaggagcagtaccagggggtgttgaaggagataaaggtcctgcggcagcag
gagcacgccatgcaggaggagtccctcggcgtccggctgcgcatcgaacagatcgagacg
accctcgcggagcacaacaacaaaatcaaacactggcagaaagaggccaccaagctgtcc
cttcattctattgatggagagccagccgagcaactccccgtacttacggccgctgacctc
gaagaaatctccaatcccaacatcatcatcaacaagatgatcactttggagaccaagagt
tcccagatgaagcccaacctcggggccattgctgagtacaagaagaaggaggagctgtac
ctgcagcgcgtggctcagctggacgagatcacgacagagagggaccagttcaaacgtggc
tacgaggacctgcgcaagcagcgcctgaacgagttcatgaccggattcaacatgatcacc
aacaagctgaaggagaactaccagatgctcacactgggtggcgacgcagagctggagctt
gtggacagcttggaccccttctcagagggcatcatgttcagtgtgcgtcctccaaagaag
agctggaagaagatcttcaacctgtcgggaggggagaagaccctgagctccttggccttg
gtgttcgctctgcaccactacaaacccaccccgctctacttcatggacgagatagacgct
gccctggacttcaagaacgtctccattgtggcctgttacatttatgagcaaacaaagaac
gctcagttcatcatcatctccctgaggaacaacatgtttgagatcgctgatcgtctcatc
ggcatctacaagactcacaacaccaccaagagcgtgggaatcaaccccaagaccatcgtg
ttcaaagagcacggcgccgtcacggcgtga
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