Pseudochrobactrum sp. XF203: LDL70_10055
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Entry
LDL70_10055 CDS
T10521
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
psxf Pseudochrobactrum sp. XF203
Pathway
psxf00470
D-Amino acid metabolism
psxf00550
Peptidoglycan biosynthesis
psxf01100
Metabolic pathways
psxf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
psxf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LDL70_10055
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LDL70_10055
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LDL70_10055
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psxf01011
]
LDL70_10055
Enzymes [BR:
psxf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LDL70_10055
Peptidoglycan biosynthesis and degradation proteins [BR:
psxf01011
]
Precursor biosynthesis
Amino acid ligase
LDL70_10055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
GARS_A
ATP-grasp_3
CPSase_L_D2
DUF7891
Motif
Other DBs
NCBI-ProteinID:
UCA44722
LinkDB
All DBs
Position
complement(2206059..2206985)
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AA seq
308 aa
AA seq
DB search
MTGKHVAVLMGGFSSERPVSLSSGAACAKALEEQGYRVTRVDVGRDVAAVLAELKPDVAF
NALHGPFGEDGAIQGILEYLQIPYTHSGVLASALAMDKGRAKLVAGAAGVAVAPSRVMNR
FDIGNQHPMQPPYVVKPVREGSSFGVVIVREGQSAPPQILGSDEWKYGDEVMVERYVAGR
ELTCAVMGDRALGVCEIIPLAHSFYDYDSKYADGGSRHECPAKISPNIYQKIQIMALQAH
QAIGCRGVSRSDFRFDENGSGDGELIWLEVNTQPGMTPTSLVPDIAKAEGYSFGELLSWM
VEDASCMR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtaaacatgttgctgtcttgatgggcgggttttcatcggagcgtccggtcagt
ctttcctcgggtgctgcctgcgccaaagcgcttgaagagcagggctatcgtgtgacgcgt
gttgatgtcggccgcgatgtggctgctgtgcttgctgaattgaagcctgatgttgcgttt
aacgcattgcacggtccttttggtgaggacggtgctattcagggtattcttgaatatctg
caaattccttacacgcattccggtgtgctggcctcggcgctggcaatggataagggtcgt
gccaagcttgttgccggtgctgccggcgtggctgtcgcgccgtcgcgcgtgatgaaccgt
tttgatattggcaatcagcatccgatgcagccgccttatgtggtgaagccggtgcgtgaa
ggttccagcttcggcgtggtgatcgtgcgcgaagggcagagcgctccgccgcagattctc
ggttcggatgagtggaaatacggcgatgaggttatggtcgagcgctatgtcgccggacgt
gaattaacctgcgctgtgatgggcgatcgcgcccttggtgtgtgtgagatcattccgttg
gcacattccttctacgattatgactcaaaatatgcagatggtggctcgcggcatgaatgt
cctgcgaaaatttcaccaaatatttaccaaaaaatacaaataatggcacttcaggcacat
caggcaatcgggtgtcgcggcgtgagtcgttccgatttccgttttgatgagaacggctcc
ggtgacggtgagctgatctggcttgaagtgaatacgcagccgggcatgacgccgacctct
ctggtgccggatattgccaaggctgaagggtattcattcggtgagttgttgagctggatg
gtggaggatgcctcgtgcatgcgataa
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