Psychrobacter sp. DAB_AL43B: DABAL43B_1952
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Entry
DABAL43B_1952 CDS
T04748
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psyc
Psychrobacter sp. DAB_AL43B
Pathway
psyc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DABAL43B_1952 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyc03400
]
DABAL43B_1952 (ung)
Enzymes [BR:
psyc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DABAL43B_1952 (ung)
DNA repair and recombination proteins [BR:
psyc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DABAL43B_1952 (ung)
Prokaryotic type
DABAL43B_1952 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
SLJ85144
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All DBs
Position
I:complement(2273438..2274175)
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AA seq
245 aa
AA seq
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MELFDVQPTKTAAQKQAILDNVRLPEDWKNALAEELTSDNMDSLRAFLKDAYQADESIYP
PAPLMFNAFNLTSLSQVKVVILGQDPYHRPGQAMGLSFSVPKAIPKPPSLNNLLKEMADD
IGTSYSAHGDLSYWAQQGVLLLNSSLTVREGEPNSHQNKGWEQFTDAVIDVINEQTEHTV
FILWGSKAQKKGKYINTEKHLILTAVHPSPLAANRGGFFGSKPFSKTNDYLVQYGQKPID
WQLPQ
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggaattattcgacgtacagccgacaaaaacagccgcgcaaaaacaagcgattttagac
aatgtgcgcttaccagaagattggaaaaatgcattagcagaagaattaacttctgacaat
atggatagtctacgtgcctttttaaaggatgcttatcaagcagatgagagtatttatcca
ccagcaccgctaatgtttaatgcttttaatttgacatctttatctcaggtgaaagtcgtc
atcttagggcaagacccttatcatcgtccaggacaagcaatggggctgtctttttctgta
cctaaagccattccgaaacctccgtcattgaataacctactcaaagagatggcagatgat
atcggtaccagttattcagcgcatggtgatttaagttactgggcacagcaaggtgtgcta
ttgcttaacagctctttgactgtgagagaaggcgagccaaacagtcatcaaaataaaggc
tgggagcagtttaccgatgctgtaattgatgtgattaatgagcaaacagagcatacggta
tttattttatggggtagtaaagcccagaaaaaaggtaaatatatcaacacggaaaaacat
cttattttaacggctgtacatccatcgccactggctgctaaccgtggtggtttttttggt
tctaagccattttcaaagaccaatgattatttggtacagtatggtcaaaaacctattgac
tggcagttaccacaataa
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