Psychrobacillus glaciei: PB01_01005
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Entry
PB01_01005 CDS
T06231
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
psyo
Psychrobacillus glaciei
Pathway
psyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PB01_01005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyo03019
]
PB01_01005
03009 Ribosome biogenesis [BR:
psyo03009
]
PB01_01005
Enzymes [BR:
psyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PB01_01005
Messenger RNA biogenesis [BR:
psyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PB01_01005
Ribosome biogenesis [BR:
psyo03009
]
Prokaryotic type
rRNA helicases
PB01_01005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QFF97503
UniProt:
A0A5J6SJE0
LinkDB
All DBs
Position
198869..200308
Genome browser
AA seq
479 aa
AA seq
DB search
MVHFKELKLDEKILRAIEQLGYTEPTEVQQRVIPVALQKQDILVKSKTGSGKTASFATPL
CELVDWEENKPQALVLTPTRELAVQVQEDITNIGRYKRIKGLALYGKSPFARQKLALKQK
THIVVGTPGRVLDHIEKGTLDVSKMEYLVIDEADEMLNMGFLEQVESIIKLLPKERTTML
FSATLSDVIKKLSSKYMKQAVSIEIDAAEENAPDIEHVKYVVREELKFSFLEKLTIIENP
DSCIIFCRTKDRVEQLVDMLDEKGYTADKIHGGMMQEDRFEVMDDFRRGDFRYLIATDVA
ARGIDIEDITHVVHYDVPLEKESYVHRTGRTGRAGRSGKSIMLATPHEDKFVKEIEDYIG
FEIPTGAELSPEAIVKSRTAFNLKMQEQPEVKESKGAQLNANITKLYFNGGKKKKLRAVD
FVGTLAKIEGVSADDIGIITIQDTVTYVEILNGKGPLVLKTMRNTTIKGKLLKVHIANK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atagtgcattttaaagagttaaagttagacgaaaaaatattacgtgccatcgaacaacta
ggctacacagagccaacagaagtacaacaaagagtaattccggttgcccttcagaaacaa
gatattcttgtaaaatctaaaacaggtagtggaaaaaccgcatcatttgcgacgccatta
tgtgagcttgtagattgggaagaaaacaaaccacaagcattagtgctcactccaacaaga
gaattagctgttcaagtacaggaagacatcacgaatattggtcgttataagcgaataaaa
ggtcttgccttgtacgggaaatcgccatttgctagacaaaaattagcgttaaagcaaaaa
acacatattgtcgtagggacaccaggacgcgtactggaccatatcgaaaaagggacactt
gatgtgtcaaaaatggagtaccttgtcatcgatgaagcagatgaaatgttaaatatgggc
tttttagaacaagtggaatccattattaaattattgcccaaagaacgcacaactatgtta
ttttccgcaactttatcagacgtgattaaaaagttaagtagcaaatacatgaagcaagct
gtttcgattgagatagatgctgcagaagaaaatgctccggatattgagcatgtaaagtat
gttgtgagggaggaacttaagttttcattcctcgaaaaattgacgattatcgaaaaccct
gacagttgtatcatcttctgccgtacaaaagacagagtggaacaattggtggatatgtta
gatgaaaaaggctatacggcagataaaattcatggtggaatgatgcaggaagaccgcttt
gaagtaatggacgatttccgtcgaggagatttccgatatttaattgccacagatgtagca
gcccgtgggattgatattgaagacatcacacatgtagttcattatgatgtgccgcttgaa
aaagaaagctatgtccatcgtactggtaggacgggacgcgcaggccgtagcggaaaatcg
attatgcttgcaaccccacatgaggacaagtttgtaaaagaaattgaagattatattggc
tttgagattcctacgggagctgagttatcaccggaagcaattgtgaaaagtcgcacagca
tttaatttgaaaatgcaggagcaaccagaagtaaaagaatcaaaaggcgctcaattaaac
gcaaacatcacaaaactgtatttcaacggcggcaagaaaaagaaacttcgcgcagtcgat
ttcgtaggaacacttgccaaaatagagggagtttctgctgacgacatcggtattatcaca
attcaagacactgtcacatacgtagaaatactaaatggcaaaggtccgctcgtattaaaa
acgatgagaaacacaacaattaaaggtaaattacttaaagtgcatattgcaaataaataa
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