Pseudomonas syringae CC1557: N018_11955
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Entry
N018_11955 CDS
T03014
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
psyr
Pseudomonas syringae CC1557
Pathway
psyr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
N018_11955
09124 Replication and repair
03420 Nucleotide excision repair
N018_11955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyr03021
]
N018_11955
03400 DNA repair and recombination proteins [BR:
psyr03400
]
N018_11955
Enzymes [BR:
psyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
N018_11955
Transcription machinery [BR:
psyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
N018_11955
DNA repair and recombination proteins [BR:
psyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
N018_11955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AHG40918
UniProt:
W0MV75
LinkDB
All DBs
Position
2573514..2575841
Genome browser
AA seq
775 aa
AA seq
DB search
MTSQTTINPDQAPAPSSDSPKRYVVAVRALCEFTAKVGDLDLRFTPSPTAQEGIAGHRTV
ASRRSADYQAELSLTGDYRELTVRGRADGYDAARNQLEEVKTYRGDLDAMPDNHRQLHWA
QVKVYGWLLCQRLQLKEVKLALVYFNIVSEQETLISEHFSAATLQQFFEQQCAIFLGWAQ
QELAHTRALHATLTTLKFPHPAFRTGQRALAESVYKAASTGCCLMAQAPTGIGKTVGTLF
PLLKAAPGQQLDRIFFLTAKTPGRRLALDALQVINCSAPELRLRVLELVARDKTCEYPDK
ACNGDSCPLANGFYDRLPAARSAALQSRWLDQASVREAALLHQVCPYYLSQELARWADVV
IADYNYYFDLSALLFGLGQLNQWRVAVLVDEAHNMVERTRQMYSASLDQSQLKALIQTAP
EPVKKALQRLDREWNALHKAQLTDYQAYSVAPDKFINSLNLCISTLGDHFNENPQAVDGT
LQGFYLEAIGFARIAELFDEHFIFDISRREAGGKRVLSRLSLRNVVPARFIRPRLTAARS
SVLFSATLSPRHYYADLLGLPTNTAWIDVESPFHHDQLDVRIISRISTRFTHRQASLAPI
VELLAEQFEARPGNYLAFFSSFDYLQQVAELMARTHPHITLWQQARGMGEAERHAFLERF
TLSSQGIGFAVLGGAFGEGIDLPGARLIGAFIATLGLPQLNPVNEQFKQRMAALFGAGYD
YTYLYPGLQKVVQAAGRVIRSQNDNGVVMLIDDRFAEPKVAQLFPAWWRPQTSGG
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcccagaccaccattaatcctgatcaggcgccagccccttccagcgattcgccc
aagcgctatgtcgtggcggtacgcgcattgtgcgagttcacggccaaggtgggcgacctt
gacctgcgtttcacgccatcaccgaccgctcaggaaggcattgccgggcataggaccgtt
gcgtcgcggcgcagcgcggattatcaggccgaactgtcgttgacgggtgactaccgcgag
ctgaccgtacgcggcagagcggatggctatgacgcagcccgcaatcagctggaagaagtg
aaaacctatcgcggcgatctggacgccatgcccgacaaccatcgccaactgcactgggca
caggtgaaggtctacggctggctgctctgccaacgcctgcaactgaaggaggtcaagctg
gcgctggtgtatttcaatattgtcagcgagcaggaaaccctgatcagcgagcacttcagt
gccgccacgctgcaacaattcttcgagcagcagtgcgcgatatttcttggctgggcacag
caggagctggcgcatacgcgggcgttgcatgccacgctgacaaccctgaagtttccacat
ccagcgttccgcaccgggcaacgtgctctggctgaatcggtgtacaaggcagccagcacc
ggttgttgcctgatggctcaggccccgaccggtatcggcaaaaccgttggcacgttgttc
ccgttgctcaaggctgcgcccggtcagcagctcgacaggattttctttctcacggccaag
acgccgggacgcagactggcgctggatgccttgcaggtaatcaactgcagtgcgcccgaa
ctcaggctgcgggtgctggaactggtggcgcgagacaagacctgcgagtacccggacaag
gcctgcaacggtgattcctgtccgctggccaacggtttttatgatcgcctgcctgcggcg
cgctcggctgcgctgcaatcgcgctggctggatcaggccagcgtgcgcgaggctgcgttg
ctgcatcaggtctgtccgtactacctgagccaggagctggcgcgctgggccgatgtggtg
attgccgactacaactattacttcgacctcagcgcattgctgttcggacttggccagctc
aatcaatggcgagtggcggtactggtcgatgaggcgcacaacatggtcgagcggacgcgg
caaatgtacagcgccagccttgatcagagccagttgaaagcgctgatccagactgcaccc
gagccagtgaaaaaagccttgcagcgtctcgatcgagaatggaatgcgttacacaaggcg
caactcactgattatcaagcctactcggtggcaccggataaattcatcaatagcctgaac
ctgtgcatttcgaccctcggggatcatttcaacgaaaacccgcaggccgtggatggcacg
ttgcaggggttttatcttgaggccatcggttttgcgcgcatcgccgagctgttcgacgag
cacttcattttcgatatcagccgacgcgaggcgggtggcaagcgcgttttgtcgcggctg
agcctgcgcaacgtggtgcccgcacgtttcattcggccgcgcctgaccgctgcgcgcagc
agcgtgctgttttctgcaacgctcagcccccgtcattactacgccgacctgctcgggctg
ccgaccaataccgcctggatcgacgtcgagtcgccgtttcatcacgaccagttggacgtg
cggattatcagccgaatttcgacccggttcactcataggcaggcgtcattggcaccgatt
gtcgagctgctggctgagcagttcgaggccaggccgggcaattatctggcgtttttcagc
agcttcgattacctgcaacaggtcgcggaactgatggcgcgcactcatccgcacattacc
ttgtggcagcaggcccgcggcatgggggaggctgagcgccatgcctttctcgagcggttt
accctgagcagccagggcatcggctttgcggtgctggggggcgcgttcggggagggcatc
gatttgccgggcgcgcgcttgatcggcgcattcatcgccaccctgggcctgccgcaactc
aatccggtcaatgaacagttcaaacagcgcatggccgcactgttcggcgctggctacgat
tacacctatctctaccccggcctgcagaaggtggtgcaagcagcgggcagggtgatccgt
agccagaatgacaatggcgtcgtgatgctgattgatgaccgctttgccgagcccaaggtg
gctcagctgtttccggcgtggtggcgacctcaaacctcaggcggttag
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