Pseudomonas syringae CC1557: N018_20440
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Entry
N018_20440 CDS
T03014
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
psyr
Pseudomonas syringae CC1557
Pathway
psyr01501
beta-Lactam resistance
psyr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N018_20440
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N018_20440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psyr02000
]
N018_20440
01504 Antimicrobial resistance genes [BR:
psyr01504
]
N018_20440
Transporters [BR:
psyr02000
]
Other transporters
Pores ion channels [TC:
1
]
N018_20440
Antimicrobial resistance genes [BR:
psyr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
N018_20440
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
N018_20440
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
N018_20440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AHG42466
UniProt:
W0N082
LinkDB
All DBs
Position
complement(4529192..4530652)
Genome browser
AA seq
486 aa
AA seq
DB search
MPRRIIRGLKPLGILALTLVISGCIGTHGIQPNGSLLPADSLATDQAIQSAAHDARWPKA
QWWHAYGDAQLDRWIELTTLGSPSLAIAVARVRQAKAMAGIAESNESLQIQSSASLQRHD
WPNDQFYGPGALADTRTWDNNASLGLSYSLDLWGRERNASEQALDLAHVSAAELRQAQLE
LQENIVRAYIQLALNYARLDIAEAALDQQQQILELAQRRLQGGIGTHFDVSQAETPLPEA
HRQIDALEEAIALSRNQLAALAGKGPGQGADLQRPALSLHSELKLPSALPAELLGQRPDV
VAARWQVEAQARGIDVARAGFYPDIDLVGSLSYMATGGGMLEFLSGSKLGYKVGPAISLP
IFDGGRLRAQLGQASAGYDLAVAHYNQTLLMALRSISDQLIRRASMDKQQVFAARSVASA
QKTYDIALIAWQRGLTNYLNVLNARTQLFHQQQIQQQVEAARLNAYAGLVVALGGGLSAG
SDLGSW
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgtcgcatcatcagagggctcaagcccctcggtattctggctttgacgctggtc
atcagcggttgtatcggaacccatggcatccaaccgaacggcagcctgttgcccgctgac
agcctggcaaccgatcaggccatccagagcgctgcgcacgatgcccgttggccgaaagcg
cagtggtggcatgcttatggtgacgcgcaactggatcgctggatcgaacttacaacgctg
ggtagcccgagcctggccatcgctgtggcacgggtgcgacaagcgaaagcgatggcgggc
attgccgagtccaacgaatcgctgcagatccagagcagcgccagtctgcaacgccatgac
tggccgaacgatcagttttatgggccaggcgcactggccgatactcgcacctgggacaac
aatgcgtcgctggggctgagttactcgttggatctatggggccgcgagcgtaatgccagc
gagcaggcgctcgaccttgcacacgtgagcgctgccgagttgcgtcaggcacaactcgaa
ttacaggaaaatatcgtccgcgcctacattcaactggccctgaattatgcccgcctggac
atcgccgaggcggcgctggaccagcagcaacagatacttgagctggcacaacgtcgcctg
caaggcggcatcggtacgcatttcgatgtcagccaggccgagacccccttgcccgaagct
catcgacagatcgatgcgctggaggaggccatcgcgctgagtcgcaatcaactggcggcg
ctggccggcaagggaccggggcagggcgctgacttgcagcggcctgccttgtcgttgcac
agcgaattgaaactgccttcggcactgcctgccgagctgcttggtcagaggcctgatgtg
gtggctgctcgctggcaggtcgaggcgcaggcgcgcggtatcgacgtggcccgtgcaggc
ttctatccggacatcgatctggtcggcagcctgagctacatggccacgggcggtggcatg
ctggaatttctgagcggcagcaagctgggttacaaagtgggtccggccatcagcctgccg
atcttcgacggtggacgattacgtgcgcaactggggcaggcgtcggccggttatgacctg
gcggtggcgcattacaaccagacgctgctaatggcgctgcggagcatttccgatcagttg
atccgtcgcgcatcaatggacaagcagcaggtgttcgccgcccggtcggtggcgtcggcg
cagaaaacctatgacatcgccctgattgcctggcaacgcggcctgacgaattacctgaac
gtactcaatgcccggacgcagctcttccatcaacagcaaatccagcagcaggtcgaggcg
gcacgattgaatgcctatgccgggttggtagtggcgttgggtggagggttgtcggcaggc
agcgacctcggatcatggtga
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