Candidatus Prometheoarchaeum syntrophicum: DSAG12_01578
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Entry
DSAG12_01578 CDS
T06555
Symbol
tfb_7
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
psyt
Candidatus Prometheoarchaeum syntrophicum
Pathway
psyt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psyt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DSAG12_01578 (tfb_7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyt03021
]
DSAG12_01578 (tfb_7)
Transcription machinery [BR:
psyt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DSAG12_01578 (tfb_7)
Prokaryotic type
Archaeal type
TFB
DSAG12_01578 (tfb_7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
RB_B
TF_Zn_Ribbon
Motif
Other DBs
NCBI-ProteinID:
QEE15751
UniProt:
A0A5B9D9R0
LinkDB
All DBs
Position
complement(1678732..1679631)
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AA seq
299 aa
AA seq
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MQIFRREELIKQEKCCANPNIGDREGFNVCLNCGVVFERIFDNSPRRAFTQEERNKRKKN
EPVYSPIGPRTIIRGNTDSKGSLIPVEEQIKFNRLGKIHRSLTSSYERNLWIALPNFQRL
QERLGIPDTVIKDAIQIYQNAVKAKLTMGRSIDILMAASIFASLKIHGIPRVVEEILTAM
DTPKKNVVKCYRLLLMRILPEMNIKVMHLGPIRYVDKFGEELNLPMKVSQDAIRLLKFAK
RHGLLIEGKDPKGLASAALYITSHIHKNPRTQNEIAKLAHITEVTLRVRVRDLKKYCRK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatttttagacgagaagaactgatcaaacaggaaaaatgttgtgcaaacccgaat
attggagatcgtgaaggttttaatgtatgtttaaattgtggagtagtattcgaacgaata
tttgataattcaccacgaagagcttttacacaagaagagcgaaataagcgaaagaagaat
gagccggtttactctccaattggaccacgaacaataattagaggaaacactgattcaaaa
ggatcattaataccagtcgaagagcaaattaaatttaatcgcttaggtaaaattcaccga
tcactaacaagtagctatgaacgcaatctctggatagcattacctaatttccaaagactc
caggaacgcctagggattcctgatacagtgataaaagatgcaattcaaatttatcaaaat
gcggtaaaggcaaaactgacaatgggtcgtagtattgatattttaatggccgcatccatt
tttgcaagcctaaagattcatggaattccaagagttgttgaagaaattcttacagcaatg
gatactccaaaaaagaatgtagtaaaatgctatcgcttacttttaatgagaatactccct
gaaatgaacataaaagtcatgcatttagggccaatcagatatgtcgataaatttggggaa
gaattaaatttacccatgaaagtaagtcaagatgcaatcagattgttaaaatttgcaaaa
agacatggattacttattgagggaaaagatcccaaaggattagcctctgctgcactctat
ataacatctcatattcataaaaatccaagaactcagaatgagattgcaaaattagcacat
attacagaggtcacccttagggttcgtgtaagagatcttaagaaatattgcaggaaataa
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