Paenibacillus terrae: HPL003_02645
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Entry
HPL003_02645 CDS
T01668
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
pta
Paenibacillus terrae
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pta03021
]
HPL003_02645
Transcription machinery [BR:
pta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HPL003_02645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_38
HTH_Tnp_ISL3
GerE
Cyclophil_like2
HTH_50
HTH_29
KORA
Lyase_1
MarR_2
HTH_10
DUF1492
TnsD
HTH_24
HTH_28
Phage_antitermQ
ELMO_ARM
Motif
Other DBs
NCBI-ProteinID:
AET57309
UniProt:
G7W1C8
LinkDB
All DBs
Position
complement(525736..526509)
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AA seq
257 aa
AA seq
DB search
MNEKVTPPESMDEAVGLIWEYQQTKDNEIATVLIRKYEPMVKMAAGKISRNRPDLYEDLY
QTGQMALIRLLQQYDISLGIPFEPYAMKSMLGHMKNYLRDKSWYIQVPRRIKEKGALVQH
AIDELTVKLERSPNVNEIAEYLDLTVEETIEVLAGRECYHYVSLDSPLSQEESAATLGEL
ISSDANDYDTVEKRMDLQQALSQLKEQEQKVLLLAFQDGQSQRAIAQTLGVSQMSVSRIQ
KRATEKLKQIMSNSSIS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaaggtaactcccccggagtcgatggatgaagctgttggtctaatctgggag
taccagcaaaccaaagataacgagattgctaccgtactgatccgcaagtatgagccgatg
gtcaagatggctgccgggaaaatctcccgtaaccgtccggacttatacgaggatttatat
caaaccggtcagatggcattgatacgtctgcttcagcaatacgatatcagcttgggtatc
ccctttgaaccgtatgctatgaaaagtatgctgggacatatgaaaaattatttgcgcgac
aaatcctggtacattcaggttccccgccgcatcaaggaaaagggtgcgctcgttcagcat
gccatcgacgagctgaccgttaaattggaacgttcgccgaatgtgaacgagattgcggag
tatttggacctcaccgtggaggaaacgatcgaagtgctcgcaggccgtgagtgctaccac
tatgtgtcactggactcacctttatcccaggaggagagtgcggctacgctaggcgagctt
atcagctcggatgcgaacgactacgacaccgtggaaaaacgaatggatttacaacaggct
ttaagccagctgaaagagcaggaacagaaggtgctccttctggcatttcaggatggtcaa
tctcaacgtgcgattgcgcagaccttgggcgtatcgcagatgagcgtatcccgcatccag
aagcgggcgaccgagaagctgaaacagatcatgtctaattcttctatctcatga
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