KEGG   Primulina tabacum: 142505597
Entry
142505597         CDS       T11246                                 
Name
(RefSeq) uncharacterized protein LOC142505597
  KO
K12828  splicing factor 3B subunit 1
Organism
ptab  Primulina tabacum
Pathway
ptab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142505597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptab03041]
    142505597
   03036 Chromosome and associated proteins [BR:ptab03036]
    142505597
Spliceosome [BR:ptab03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    142505597
 Complex B
    142505597
 Complex C
   U2 SnRNP specific factors
    142505597
Chromosome and associated proteins [BR:ptab03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    142505597
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_MROH2B_C TPR_DNAAF5 HEAT_EF3_N TPR_IPO5 HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG Vac14_Fab1_bd ParcG UME Adaptin_N
Other DBs
NCBI-GeneID: 142505597
NCBI-ProteinID: XP_075474767
LinkDB
Position
10:complement(5751182..5755770)
AA seq 1257 aa
MDVDTEIQRVKEERQKMEKDLAALTSLTFDTDLYNANKYEGYERSIAVNDEDDNIDGTEN
EIARKMASFTAPKQFLKEHLRTGEEDDMSGFKQPSKIIDREDDYRRRRLNRIISPARNDP
FLDKTPGPEVRTYADVMREEALKRKEEEVKREIAKKKKEEEESKAKEKDVEKPKKRNRWD
ISQDESAVDKKAKTGSDWDLPDSTPGIGRWDATPTPGRIGDATPSVSRRNRWDETPTPGR
LNDSDATPSGGVTPGATPAGMAWDATPKLGGMATPTPKKQRSRWDETPATMGSATPGATP
AAAYTPGVTPFGAVDMATPTPNAIMRSAMTPEQYNLLRWEKDIEDRNRPLTDEELDAMFP
QEGYKILDPPATYVPIRTPARKLLATPTPMATPLYNIPEENRGQQFDVPKEMPGGLPLMK
PEDYQYFGSLLNEDNEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGA
GPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY
ARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFL
KAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITALS
LAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDAIYASYYTKE
VMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEPDYIRNDILPEFFRNFWVRRMALDRR
NYKQLVETTVEIANKVGVADIVGRTVEDLKDESEPYRRMVMETIEKVVTNLGASDIDARL
EELLIDGILYAFQEQTSDDANVMLNGFGAVVNTLGHKVKPYLPQICGTIKWRLNNKSAKV
RQQAADLISRIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMT
KMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLK
AHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFT
VLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQT
AASAVKHMALGVAGLGCEDALIHLMNYVWPNIFETSPHVINAVMEAIEGMRAALGAAIVL
NYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPVLEDEENNVFSRPELHIFV
NT seq 3774 nt   +upstreamnt  +downstreamnt
atggacgtggacacagagattcagagggtcaaagaagaaaggcaaaagatggagaaggac
ctggctgcactaacgtcccttacttttgacaccgatctttataacgcaaacaagtacgag
ggctacgagcgatccattgctgtcaatgatgaggatgataatattgatggaacggaaaat
gaaattgctaggaaaatggcatcttttactgccccgaaacagtttcttaaggagcatttg
agaactggggaggaggatgacatgtctggttttaagcaaccaagtaagattatcgacagg
gaggatgattacaggaggaggaggttgaacaggatcatatcccctgcgaggaatgatcca
tttttggacaaaacgccaggcccagaagtcaggacttatgctgatgtaatgagagaagaa
gcattgaagcggaaggaagaggaggtgaagagggagatagcaaagaagaagaaggaagaa
gaggaatcaaaagcaaaggagaaagatgtagagaagccaaaaaagaggaatagatgggat
atatctcaggatgagagtgctgttgacaagaaggccaagacggggtctgactgggatttg
cctgactccacgcctggaattggaaggtgggatgcgaccccgacacctgggagaattggt
gacgcaacaccatctgtttcaaggagaaataggtgggatgagacaccaacaccaggacgc
ctaaatgattcggacgcaactccttctggaggggttacgcctggggcaactccagcagga
atggcttgggacgctacaccaaagctgggagggatggctaccccaacaccaaaaaaacag
aggtcaagatgggatgagactccagccacaatgggcagtgccacaccaggtgctacccct
gccgcagcctatacccctggtgtcactccttttggtgctgtcgatatggctacccctact
ccgaatgccattatgcgtagcgcaatgactcctgaacagtataatttgttgagatgggag
aaagatattgaggataggaataggccattaactgatgaggaacttgatgcaatgtttcca
caggaaggatataagattttggacccacctgctacctatgtacctattagaacacctgcc
cggaaacttcttgctacacctactccaatggcaacacccctgtataatatcccagaagaa
aaccgaggccaacagtttgatgtgccaaaagagatgccgggtggtttgccattgatgaaa
cctgaggattaccagtattttggttcactgctaaatgaagacaatgaagaggagttatcg
ccagaagagcagaaagagagaaagatcatgaaactcttgctgaaagtaaaaaacgggact
cctccacagaggaaaactgcattgagacaactcacagataaagcaagggaatttggtgct
ggaccactgtttaaccgtattttgccactgctcatgcaacccacattggaggaccaggag
agacatttgttggttaaagttattgatagggtgctctataaattagatgagttggttcgt
ccatatgtgcacaaaattttggtggttatcgagcctcttttaattgatgaggattattat
gctcgggtagaaggtagagaaatcatctcaaatcttagcaaggcggctgggttggccaca
atgattgctgcaatgcgtccagatattgacaacattgatgagtatgttaggaacaccact
gcaagagcttttagtgttgttgcctctgctcttgggatccctgcattgctgccattcttg
aaagctgtgtgtcagagcaagaaatcttggcaagctcgtcacacaggtatcaaaatagta
caacagattgccattctgattggctgtgctgttcttccacatctgagatcactggttgag
ataattgaacatggtcttaatgatgaaaatcagaaagtcagaacgatcactgctctatcc
ttggctgcgcttgctgaggctgcagcaccctatggtattgaaagctttgactcagttttg
aagcctctgtggaagggtataaggtcccaccgtgggaaggtgttggctgcctttttgaaa
gccattggttttatcataccactcatggatgcgatatatgccagctactacaccaaggaa
gtcatggttattcttatccgtgagttccagtcacctgatgaagaaatgaagaaaatagtg
ctcaaagtggtaaaacagtgtgtgagtactgagggtgtagagccagattatataagaaat
gatattcttccggagtttttccgtaatttctgggtcagaaggatggccttggacaggaga
aactacaaacagcttgttgaaaccactgttgagattgcgaacaaagttggtgttgctgac
atagtgggaagaaccgtggaggacctgaaagatgaaagtgagccatatagaaggatggtt
atggagacaattgagaaagtggtgacaaacttgggagcatctgatattgatgctcgctta
gaagagctattgattgatgggattctctatgcgtttcaagaacagactagtgatgatgct
aatgtgatgctaaatggttttggtgctgttgtgaacacccttggtcacaaagtgaagcca
taccttccccagatttgcggtaccattaaatggaggcttaacaataagagtgctaaagtg
agacagcaggcagcagatcttatatccaggattgcagtggttatgaagcagtgtggagaa
gaacaattaatgggccatcttggtgtcgtattgtatgagtatttgggagaggagtatcct
gaagttctgggttcgatattgggcgctctcaaggctatcgtcaatgttatcgggatgacc
aagatgacaccgccaatcaaggatttgctccctcggttaactcctatcttgaagaaccgt
catgagaaagtccaagaaaattgtatagatcttgttggaagaattgctgaccgaggagct
gaatttgttcctgcaagggagtggatgaggatttgttttgagcttctggagatgctgaaa
gctcacaagaagggtatccgtagagcaactgtgaatacttttggttatattgcaaaagcc
attgggccacaagatgttcttgcaacattgctaaacaacctcaaggtgcaggaacgtcaa
aaccgggtgtgcacaactgtggccatagcaattgttgctgaaacatgttcaccattcacg
gttttacctgcattgatgaatgagtaccgtgtgccggagctcaatgttcagaatggtgtt
cttaagtctctttccttcctatttgagtacataggcgagatgggcaaggactacatttat
gcagtgactccattactcgaggatgccctcatggaccgagatttggttcatcgtcaaact
gccgcatcagcagtcaaacacatggccctgggagttgctggtctgggatgtgaagacgct
ttaatccacctgatgaactatgtctggcccaacatttttgagacatccccacacgttatt
aacgctgtcatggaagctattgaaggaatgagggcggcacttggggcagctattgtgctg
aactattgtcttcagggactctttcatccggcaagaaaggttagagaagtttactggaaa
atttacaattccctttacattggtgctcaggatgctcttgttgcctcatatcccgtacta
gaggacgaagaaaataatgtgttcagcagacctgaactgcatatatttgtctga

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