Primulina tabacum: 142519110
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Entry
142519110 CDS
T11246
Name
(RefSeq) meiotic recombination protein SPO11-1
KO
K10878
meiotic recombination protein SPO11
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptab03036
]
142519110
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
142519110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
JetD_C
DUF7281
Motif
Other DBs
NCBI-GeneID:
142519110
NCBI-ProteinID:
XP_075478148
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Position
11:2231128..2235902
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AA seq
367 aa
AA seq
DB search
MEDERGNGEQDSEFDRLYLLKKIGDITRSLLECLVSGRSPTLYIDQFSTYCIEASGYCCC
RSDLPNGKEILTMQGESHARRLDVLLRVLLIVQQLLQENIHGSKRDIYYMHPSVFREQSV
VDRAINDICILLHCSRHNLNVVSVGNGLVMGWLRFTEAGRKFDCINCPNMAHHIPVHVED
VEDIISVAEYILIVEKESVFQRLANDQFCKHNRCIVITGRGYPDVPTRRFLHLLTKTLHL
PIYCLVDCDPHGIDILTTFRFGSMQMAYDAKSLRLPAIRWLGAFPSDCKTYQLPQQCLLP
LTDEDKHKLRGMLHRCYMEREVPYWRFELKQLLDSGVKFEIEALSANSLSFLTESYLPSK
IRKGAYI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaaaggggaaacggcgaacaagattctgagtttgatcgcttgtacttgctg
aagaaaatcggagacatcactcgatccttgctcgaatgtcttgttagcggtagatcacca
accttatacatcgatcaattcagtacctactgtatcgaagcttctggatactgctgctgc
agatctgatttacccaacggaaaggagattcttacaatgcaaggagaaagccatgcacgt
agattggatgttctgctaagagttctcttgatagttcagcaactcctgcaagaaaacatt
catggttcgaaaagagatatatattacatgcacccttctgtttttagagagcaatctgtg
gttgatcgggctataaatgatatttgcatccttctgcactgcagtcggcacaacctgaac
gtggtatctgttggaaatggattggtaatgggctggctgagatttacagaagctgggagg
aaattcgattgcattaattgtcctaacatggcgcaccatattcctgtgcatgtagaagat
gtagaagatataatcagtgtggccgagtacatattgattgtggagaaagaatcagtattt
cagaggctggcaaacgaccagttttgcaaacataaccgatgcattgttatcactggaaga
ggatatcctgatgttcccacaagaagatttttgcatctacttactaaaacattgcatctg
cccatatattgcttggtggattgtgatccacatgggatcgatatcttgacgaccttccga
tttggttccatgcaaatggcttatgatgccaaatcactacgtctcccggctattcgttgg
cttggagcatttccatctgattgtaaaacatatcaactcccacaacagtgtctcctacct
ttaactgatgaagataagcataagctcagaggcatgttgcataggtgttatatggaacgt
gaagtaccctactggaggttcgaactcaagcaactgttggacagtggagtgaaattcgag
attgaagcattgtctgcaaactcactttcattcttgacagagagttatctcccatccaaa
atccgaaagggagcatacatctaa
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