Primulina tabacum: 142519384
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Entry
142519384 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142519384
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142519384
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
142519384
NCBI-ProteinID:
XP_075478501
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Position
11:complement(1571367..1572864)
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AA seq
382 aa
AA seq
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MAAPTSLPLTLITLLLAFVNLSPSLAKSYYTPKILNPIDSCWRSKSNWAANRHALANCAV
GFGKNAIGGKYGAIYVVTDPSDDPGNPKWGTLRYGVIQAKPLWIVFGRSMVITLKNELMI
NSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGIVRDSPTHAGRRRGS
DGDGIDIFDSTDVWIDHCYLAHCYDGLIDVIHASTGITISNNFFSNHDKVMLFGHDDKNV
EDKAIKVTVAFNHFGPGLVQRMPRVRLGYAHVANNRYDQWKMYVIGGSANPTIFSEGNYY
MAPNNRDRKLVTKREVKSGWTNWKWRSSKDKFMNGAYFVPSGYGSISPGYTYAQSFRVAD
GSLAPALTSDAGPLTCTAYKPC
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggctgccccaacttctcttccactaaccctaattaccctccttctagctttcgtcaac
ttatctccatcactagctaagagttactacactcccaaaatcttaaatccaatagactca
tgctggaggagtaagtcaaactgggccgctaatcgtcatgccctggctaattgcgcagtt
gggttcggtaaaaatgccattggaggaaaatatggtgcaatttatgtcgttacagatcca
tcagacgacccaggaaaccctaaatggggtacccttcggtacggtgtgatccaagctaaa
ccattgtggattgtttttggtagaagcatggttattacactgaaaaatgaactcatgatc
aatagctacaagaccatagatggaagaggggctaaagtggagattgcttatgggccatgc
atcactatccagcatgttagccatgtgatcatccatgggatcagtattcatgattgcaaa
cctggaaaatcgggtatagttcgtgatagcccgacccatgctgggcgtcgtcgtggatct
gatggtgacgggatcgacatatttgattcaactgatgtttggatcgatcattgttatctt
gctcactgttatgatggattaattgatgtaattcatgcctcgactggaatcactatttct
aacaacttcttctctaaccacgacaaagttatgttatttgggcacgacgataaaaacgta
gaagacaaagcaataaaagtgacagtagcatttaaccattttggcccgggtttagttcaa
agaatgccaagggttaggctaggttacgcacatgtggcaaacaatagatatgatcaatgg
aagatgtatgtcatcggcggaagcgcgaatcccaccattttcagtgagggaaactactac
atggcgcctaataaccgtgaccggaaactagttacaaagagagaggtgaagagtggttgg
acgaactggaaatggagatcatcaaaggacaaatttatgaatggcgcatactttgttcca
tctggatatggaagcatttccccaggctacacctatgcgcagtcatttcgagtggctgat
ggatccttggctccggctctaacatccgatgcaggcccattgacctgcactgcctacaaa
ccatgttga
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