Primulina tabacum: 142525224
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Entry
142525224 CDS
T11246
Name
(RefSeq) putative pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142525224
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142525224
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
142525224
NCBI-ProteinID:
XP_075485552
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Position
14:4261987..4263837
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AA seq
402 aa
AA seq
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MKIPLFSVILLPLFLNAASILSSPVQDPELVVQEVNEKINVSRRNLGFLSCSTGNPMDDC
WRCDPDWEKNRQRLADCTIGFGKHAIGGRDGKIYVVTDSGDDAVNPKPGTLRYGVIQNEP
LWIIFTRDMVIKLKQELMLNSFKTIDGRGASVHIAGGPCITIQFVTNIIIHGINIHDCKQ
GGNAYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCTLSNCRDGLIDAIHGSTAITLSN
NYLTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
MYAIGGSADPTINSQGNRFLAPDRVENKEVTKHEDAPESKWKHWNWRSEGDLMLNGAFFT
PSGAGASSNYAKASSLSARPSSLVSSMTDGAGALSCKKGKRC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcccacttttctctgttatattacttcctttattcttgaatgcagcttccata
ttatcttcaccagttcaagatcctgaactagtagtccaagaagtcaatgagaaaatcaac
gtatcaagaaggaacttgggatttctctcatgcagcacgggtaacccgatggacgattgc
tggcgttgcgatcctgactgggaaaagaaccgccagagactcgcggactgcaccattggg
ttcggaaaacacgcaatcggtggcagagatggcaagatttacgtagtcacggactcgggg
gatgatgcagtgaatccaaagccaggaactttacgttatggtgtcatccaaaacgagcca
ttgtggatcattttcacccgtgacatggtgatcaaactcaaacaagaactcatgttaaac
tcattcaaaaccattgatgggagaggagcaagtgtacacatagctggaggaccgtgcatc
accatacaatttgtaacaaatatcatcatccatggaataaatatacatgattgcaagcaa
ggggggaatgcgtatgtgagggattcacccgagcattatggatataggacagtgtccgac
ggagatggggtgtcgatattcggggggagccatgtttgggtcgaccattgtacgttgtct
aattgtcgcgatggcctgatcgatgccattcacggctccacggctatcacgttgtcgaat
aattacttgactcatcatgacaaggtcatgcttttggggcatagcgatagttatacacaa
gataagaacatgcaagtaaccattgccttcaaccatttcggagaagggctcgtgcagagg
atgccaagatgcaggcatgggtattttcatgtggtgaataatgactacacacattgggaa
atgtatgcaattggtggcagtgcagatcctacaataaacagccaaggcaatagatttctt
gcaccagacagggtggaaaataaagaggtgaccaagcatgaggatgcacccgaaagcaaa
tggaagcactggaattggagatcagaaggagaccttatgctaaatggggcattcttcact
ccatctggtgccggtgcctcgtctaattacgccaaggcatctagcttgagtgcgagacca
tcgtccctggtgagctccatgaccgacggagccggtgcactcagttgcaagaaaggtaaa
cggtgctag
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