Primulina tabacum: 142527652
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Entry
142527652 CDS
T11246
Name
(RefSeq) putative pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142527652
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142527652
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
XFP
Motif
Other DBs
NCBI-GeneID:
142527652
NCBI-ProteinID:
XP_075488629
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Position
15:complement(32531966..32537173)
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AA seq
432 aa
AA seq
DB search
MAMGASEKWLRPLFSLLLLVLFVGAMARVHKNETRSFRWEGIDEGALNEHAVDDPEEVAK
MVEMATRNSTERRNLGYFSCGTGNPIDDCWRCDPNWQRNRKRLADCGIGFGRNAAGGRDG
RFYVVTDSGDDDPVNPRPGTLRYAVIQEEPLWIVFKRDMIITLKQELIMNSFKTIDGRGV
NVHIANGGCITVQFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTTADGDAISIFGSS
HIWVDHNSLSHCADGLVDAVMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAY
NHFGEGLIQRMPRCRLGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYLAPANRFAKEV
TKRVDTAESKWKGWNWRSAGDLMLNGAYFTPSGAGASASYARASSLGAKSSSMVGSITSG
AGVLGCRPGRQC
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgggagcttcggaaaaatggctgcggcctctgttttctttgctgctgctcgtg
cttttcgtcggagcaatggcaagagttcacaaaaacgaaacccgaagtttcaggtgggaa
ggaattgacgagggtgctttgaatgagcatgcggtggatgacccggaggaggtcgcaaaa
atggttgaaatggccactcggaacagcacggagaggcgaaatcttggatatttctcctgt
ggaactggtaaccctattgatgactgttggcgttgtgatcctaactggcagagaaaccgc
aagagacttgctgactgtggtattggttttgggcgcaatgccgccggcggacgtgatggc
cgattctatgttgtcactgattctggtgatgatgaccctgtcaaccccaggcccggcact
ttacgttatgctgttatccaggaggagcctctttggatagtgttcaagcgcgacatgatt
attactttgaagcaagagctcataatgaacagctttaagaccatagatggtcgcggagtc
aatgtgcacattgccaatggaggctgcatcacagtccaattcattaccaatgtgattatt
catgggctgcacattcacgactgtaagccgacaggaaacgcaatggtgcggagctcacca
tcacattatggttggaggacgacggctgatggtgatgccatttctatctttggatcgagc
catatttgggtcgatcataactcgctctctcactgtgctgacggccttgtagatgctgtc
atgggctctactgccatcaccatttcaaacaattattttacccatcataatgaggttatg
ctgttgggtcatagcgattcttatgtcagagacaagcaaatgcaagtgaccatcgcctat
aatcatttcggggaaggcctcattcaaagaatgccaaggtgcagacttggatacttccac
gttgtgaacaatgactacactcattgggagatgtatgccatcggtggaagtgcaaacccc
actatcaacagccaaggcaacagatatcttgcaccagccaatcgttttgcaaaagaggtg
acaaagagggtagatacagctgagagtaaatggaagggttggaactggagatcagcaggt
gacttgatgttgaatggagcttatttcactccatctggagccggagcttcggccagctat
gctagagcttcaagcttaggtgccaagtcttcctccatggttggatctatcacttctggt
gctggagttcttggttgccggcctggccgccagtgctaa
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