Primulina tabacum: 142528756
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Entry
142528756 CDS
T11246
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142528756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142528756
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142528756
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_2
Motif
Other DBs
NCBI-GeneID:
142528756
NCBI-ProteinID:
XP_075490017
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Position
16:complement(30317664..30325498)
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AA seq
865 aa
AA seq
DB search
MASDTDMAGWTDLLHSSSKLLEQAAPSTQFPPLQRNLDQLEALSKKLKAKTLRTEAPSQS
IAATRLLAREGLNAEQLARDLKSFELKTTYEDVFPAEATTVEEYLQQVREMAMVSAVQEA
QKDNLRSFNDYMISVLEEDWRKEKRDFLQSLSRIATLPKKNISDSSPGVVARYGQIVPAI
SSPQVSSTPSGMELATLGNKLVLEKKAVVYAEVVKNLNSAKERGIAFKPAAAFGNAYESL
KLDTAGSKSVNMLKIWHLVMALMGEHLNVHRNVSKKMSLILGARHHLEWGHGKYVMDMIQ
NYPAQAALGGAVGNLQRIRAFLRIRLRDYGVLDFDADDFRRQPPIDTTWQQIYFCLRTGY
YDDAREVSRTSRASQNFSPMLAEWISTGGMVSADTASAASEECEKLLRMTDRAGRASYDK
KKLLLHAIISGSRRLIDRLLRELPTIFNTIEDFLWFMLSAVRVGSVGSSSSAVLSDGLSP
YSLEDLQSYLNKFESSYYTKNGKDPLVYPYVLLLSIQLLPAVHHLSKDVGDEGYSVDAVH
ISIVLSDYGILSESSGSGQKLGVMDAFAEASSMIRQYGAAYLGHGDLETALEYYVQAAAA
VDDGKLSLTGIGNIDQRRHRTLLLKQLLMEILLRDGGIYLLIGSRGSGEEGQLGRFLTEA
KTRQQFLLDSAGLCLQSGLYDKAIEIQKRIGAFSAALDTINKCLSEAICSLSRGRLDGES
RITGFIHSGNEILEMFKYYPEISPQERENVMEQQTVLRQLEAILAIHKLSRLGNLLDALR
EVAKLPFLPLDPRAPDSVSNAFQNLSPHVQACVPGLLKVALHCLDTLSDTDGSLRSLRAK
IANFLANNLNRNWPRDLYEKVARSL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgacacagacatggctggatggactgatcttttgcattcctcttcgaagctt
ctcgaacaagctgctccgtccactcagttccccccgcttcagaggaatttggatcagttg
gaagccctgtcgaagaagctgaaggcaaaaactttgcgaactgaagctccttctcagtcc
attgctgccaccaggctattagcccgtgagggattgaatgctgagcagcttgctcgtgat
cttaaatccttcgaattgaagacaacatatgaagatgtctttcctgctgaggctactact
gtcgaagagtatctacagcaggtccgtgaaatggcaatggtctcagctgttcaggaagct
cagaaagataatcttagaagttttaatgattatatgatttctgttttggaggaagattgg
cgaaaagaaaaaagagatttcctgcagagtctgagccgaattgcgaccctaccaaagaaa
aatataagtgattctagccctggggtggttgctcgctatggtcaaatagttcctgctatt
tctagtcctcaggtttcatccaccccatcaggtatggagctggcaactttggggaataaa
cttgtactagaaaaaaaggcggtcgtatatgcggaagttgtgaaaaatcttaacagtgcc
aaggagcgtggcatagccttcaaacctgctgcagcttttggaaatgcatatgagagtctg
aaacttgatactgctggttcaaagtctgtcaacatgctgaaaatatggcacctagttatg
gccttaatgggtgagcatttaaatgttcatcggaatgtttccaaaaaaatgtccttaata
ctgggagcacggcaccatctggagtggggacatgggaagtatgtgatggatatgattcaa
aattatcctgcacaggctgctcttggtggagctgtgggtaatcttcaaagaatccgtgcc
ttccttcggatccgtttacgggattacggagtgcttgattttgatgccgatgattttcgt
cggcagcctccaatagataccacatggcaacagatatacttttgcctgagaactggatac
tatgatgatgccagagaagtttcgcggacatctcgtgcttcacagaattttagtcctatg
cttgctgaatggatctctactggaggcatggtttcagcagacactgcatctgctgcttcg
gaagaatgtgagaaattattgcgaatgactgacagggcgggccgagcatcatatgacaaa
aaaaaattactcttgcatgccattatttctggttccaggaggcttatcgatcgattactt
agagaacttcccacaatctttaatactatcgaggatttcttgtggttcatgttgtctgct
gtacgagttggctctgttggttcctcttcttcggctgtcctaagtgatggattatcccct
tacagtttggaagacttgcagtcttatctgaataagtttgagtcttcatattatacaaag
aatggaaaggatcctttggtgtatccatatgttttacttttgagcatccagctacttcct
gctgttcaccatttgtccaaagatgtaggagatgaaggatatagtgttgatgctgtgcat
atatcaatcgtgctgtcagactatggcatactctcagaaagttctgggtcaggtcaaaag
ttgggagttatggatgcttttgctgaggcatctagtatgatcaggcagtatggagctgcc
tatttgggacatggtgacttggaaacggcactggaatattatgttcaagctgctgctgct
gtcgatgacgggaaattatcgttgaccggtataggtaatatagatcaacgaaggcacagg
accttgcttttaaagcaactgctgatggagattttgttacgtgatggtgggatttatctt
ttaattggctcgagaggttctggagaagaaggtcagttgggaagatttttgactgaggcg
aaaaccagacagcagtttctgctcgattcagctggattgtgtctgcagtctggcttatat
gataaagccatagaaattcagaagagaattggagcattttcagctgcattggacactata
aataaatgtctctctgaagcaatttgttccctatcacgtggtagattggatggtgaaagt
aggattactgggtttatacactctggaaatgagatattggagatgttcaagtattaccca
gaaatcagtcctcaagaaagagagaatgtaatggagcaacaaacagtgctaagacagctg
gaggcaatattagccatccataaactttcaagattgggaaatcttctagatgccttgagg
gaggtagcaaagctcccatttcttcctttggatcctagggctcctgattcagtctccaat
gctttccagaatttatcgccacatgtccaagcctgcgtgcctggtcttctcaaagtcgcg
ctgcattgtttggacactctatcagatacagatggttcattacgctccttgagagctaag
attgccaactttctggctaacaatctgaatagaaattggccccgtgatttgtacgaaaag
gttgctcgtagcttgtga
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