Primulina tabacum: 142537084
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Entry
142537084 CDS
T11246
Name
(RefSeq) putative pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142537084
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142537084
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
142537084
NCBI-ProteinID:
XP_075498762
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All DBs
Position
2:complement(54223718..54225873)
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AA seq
450 aa
AA seq
DB search
MGSIKFNSLIVLFYAFASFLPTLRANFAEFDEFWQRRAAEAWNRTLESYEQEPHKIVSHL
NMNVHRTLKEIGLDHSSSNNSTRRHLGKSSYSGPCQATNPIDRCWRCQPNWASNRFRLAD
CGLGFGYKAKGGKNGKIYVVTDSSDDNVLNPKPGTLRYAVIQKEPLWIIFERDMIIRLSQ
ELIMESNKTIDARGARVHIANGAGITIQYVSNVIIHGLRIHDIVQGSGGLVRDSVDHFGL
RTRSDGDGISIFGAQDIWIDHVSMTNCYDGLIDAIMGSTGITISNGHFTDHNEAMLFGAS
DSHSQDAIMQITVAFNHFGKRMVQRMPRCRWGYFHVVNNDYTHWNMYAIGGSQHPTIISQ
GNRFIAPPENPYAKEVTKRDYAPESVWKQWTWRSEGDLFLRGAFFVQSGDPNWSSKHPEK
FDKISAASATLVAEMTKFAGWLNCRPGVPC
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcattaaatttaattcgttaatcgtcttgttttatgcttttgcttcgtttctt
cccaccctgagagctaatttcgcagagtttgatgagttctggcaaaggcgagccgccgag
gcctggaatcgaaccctggaatcttacgagcaagaaccccataaaatagttagccacttg
aacatgaatgtccacaggacattgaaagaaataggactggaccattcgagctcaaacaat
agcacgagaagacatctaggaaagagttcctacagcggcccatgccaggctaccaatccc
atcgacaggtgctggagatgccagcccaattgggcctccaaccggttcaggctcgcagac
tgcgggttaggctttggctacaaggcgaaggggggaaagaacggcaagatctacgtggtg
actgactcctcggacgacaatgtcttaaacccgaaaccagggactctacgctacgcggtg
atccagaaggagccgctctggatcatattcgagcgcgacatgatcatcaggctctcgcag
gagctgatcatggagagcaacaagaccatcgatgctcgtggggcgagggttcacatcgct
aatggagcggggatcacgatccagtacgtgagcaatgtgatcatacatgggttgaggatt
catgacattgttcaagggagtggaggcttggtgagggactccgtggatcatttcgggttg
aggacgaggagtgatggtgacgggatctctatttttggggctcaggatatatggatcgat
catgtgtcgatgacaaattgctacgacggccttatagatgcgatcatgggctcgactggc
atcaccatctccaacggccatttcaccgatcacaacgaggcgatgcttttcggggcgagc
gacagccactctcaagacgcgataatgcagataacggtggcattcaaccacttcggtaag
agaatggtgcagagaatgccgcggtgcagatggggttatttccacgtcgtgaacaacgac
tacacgcactggaacatgtatgccatcggtggtagccagcaccctaccattatcagccag
ggaaaccggttcatcgcccctcccgaaaacccttacgccaaggaggtgacaaagagagac
tatgcaccagaatcagtgtggaaacagtggacatggagatcagagggcgatcttttcttg
agaggagcattctttgttcaatccggtgacccaaactggtccagcaaacatcccgagaaa
ttcgacaagatatcggctgcctctgcaacgctcgtagcagaaatgaccaagtttgccggt
tggctcaactgcaggccgggggtaccatgttag
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