Primulina tabacum: 142545770
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Entry
142545770 CDS
T11246
Name
(RefSeq) DNA topoisomerase 6 subunit A-like
KO
K10878
meiotic recombination protein SPO11
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptab03036
]
142545770
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
142545770
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Topo_VI_alpha
Motif
Other DBs
NCBI-GeneID:
142545770
NCBI-ProteinID:
XP_075509248
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Position
5:4938864..4940782
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AA seq
422 aa
AA seq
DB search
MADKKKRRRATTDSDSEADPVQFKSKLKPDSTILQTLQTLKSAASTSAAATKPLGLSDLN
LSTTCREVSDLPLSSVRSTIESLVLSLAHSILSGNGFSFSVPSRSAANQLYVPELDRIVL
KDKSSARPFAAVSSVRKATITTRILQLVHQLCLKNIHVTKRDLFYTDVKLFQDQTQSDAI
LDDVSCILGCTRSSLNVVAAEKGVVVGRLIFSDNGDMIDCTKMGIGGKAIPPNIDRVGDM
QSDALFVLLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKVELKLPVLA
LVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGIRPSDLYKYKIPEQCRLPMTEQ
DIKTGKDLLEEDFVKKNPGWVEELNLMVKSKQKAEIQALSTFGFQYLSEVYLPLKLQQKD
WL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcggataagaagaagcgccgccgagcaaccaccgactccgactctgaagctgatccg
gttcaattcaaatctaagcttaaacccgactccaccatcctccaaacacttcaaactctc
aaatcagctgcgtccacctccgcggccgcaacgaaaccccttggactctccgacctcaac
ctctccaccacctgccgtgaagtctcggaccttcccctttcatccgttcgttcgaccatt
gaatccctcgtcctctcactagcacactccattctctccggcaacggattctccttctcg
gtgccatctcgctccgccgccaaccagctatacgttcccgagctcgatcgtatcgtgctc
aaagacaaatcttccgctcgaccattcgccgccgtctccagcgtccggaaagccaccatc
accacccgtatactccagctcgtccatcagctgtgtctgaagaacatccatgtcactaag
cgtgatctcttctacaccgacgtcaagctcttccaggatcagacccaatccgacgccata
ctcgatgatgtctcctgcattcttggatgcactaggtcaagcctcaatgtggttgctgcg
gaaaaaggggtggttgtagggaggctgatatttagtgataatggagacatgattgattgc
accaaaatgggaataggaggaaaggcgatacctcccaatatagatagagtcggggatatg
cagagtgatgcattgtttgtcctcctagtggagaaagatgctgcgtacatgaggttggcc
gaggataggttttacaataggtttccttgtataattgttaccgctaaaggccagccagat
gtggcaacaagattgttcttgaggaaaatgaaggtggaattgaagttgcctgtgttggca
ctggtggatagcgatccctacggactaaagattctgtccgtctacatgtgtgggtccaag
aacatgtcgtatgacagtgcaaacttgacgaccccggacataaaatggttggggatacgc
ccgagtgatctttataaatacaagattccggagcaatgtaggttgcctatgacagagcag
gatataaaaactgggaaagatttattggaggaggatttcgtgaagaagaatcctgggtgg
gtggaagagttgaatttgatggtgaagtcgaagcagaaggcggagattcaggcactgagc
acttttgggtttcagtatctctccgaggtttacttgccactaaagttgcaacagaaggat
tggctctaa
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