Primulina tabacum: 142548087
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Entry
142548087 CDS
T11246
Name
(RefSeq) putative pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142548087
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142548087
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
142548087
NCBI-ProteinID:
XP_075512562
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Position
6:complement(16448371..16450117)
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AA seq
401 aa
AA seq
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MEIPLFPLTSLLLLLPLLTLSSTIPDPELVVQEFNEKANASRRNLGSLSCGTGNPIDDCW
SCDPNWKNNRQRLADCAIGFGRGATGGRDGKIYVVTDSGDDAVNPKQGTLRYGVIQSEPL
WIVFSRDMVITLKQELMITSFKTIDGRGVSVHIANGPCITIQYVTNVIIHGINIHDCKIG
GNAYVRDSTKHFGWRGLTDGDGVSIFSSSNIWIDHCSLSNCQDGLIDAIRGSTAITISNN
YMTHHDKVMLLGHSDSYTRDKAMQVTIAFNHFGEGLSQRMPRCRHGYFHVVNNDYTHWRK
YAIGGSAAPTINSQGNRFLAPDDRVHKEVTKHETAPQSQWKKWNWRSQGDLMLNDAFFTL
SGAGASSNFAKASSLSARPSSLVSSMTAWAGVLDCKEGSAC
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcccacttttccctctaacatcacttcttctattgcttccacttctcacatta
tcttccacaattccagaccctgaactagtggtgcaagaatttaatgagaaagctaatgcg
tcgagaaggaatttgggatctctatcctgtggaacaggcaaccccatcgacgattgctgg
agttgtgatcctaattggaaaaacaataggcagaggttggcggattgcgcgattgggttc
ggaaggggtgccactggtggaagagatggcaagatttatgtagtgacggactcgggagat
gatgctgtgaatccaaaacaggggactctgagatacggtgtcatccaaagcgagcctttg
tggatcgttttctcgcgcgacatggtcattacactgaagcaagaactcatgataacctcg
ttcaaaaccattgatggcagaggtgtgagtgtgcacatagctaacgggccatgcataacc
attcaatatgtcacaaatgtcatcatacatggcatcaacatacatgactgcaagataggg
gggaatgcttatgtgagggattctactaagcattttggatggagaggcttaacagatggt
gatggagtgtctatattcagttccagcaatatctggattgatcattgctcgttgtcgaac
tgccaagacggcctcatcgatgccataaggggctcgacagccatcaccatttcgaacaat
tacatgacacatcatgataaggtcatgctcttggggcatagtgatagttacacacgtgat
aaagccatgcaagtcaccattgcctttaatcatttcggagaagggctcagccagaggatg
ccaagatgcaggcatggctattttcatgttgtgaacaatgactatacacactggagaaag
tatgcgattggtggaagtgcagctcctactatcaacagccaaggcaatagatttcttgca
cctgatgatagggtccataaggaggtgaccaaacatgagactgcaccacagagccaatgg
aagaaatggaactggagatcgcaaggcgacttgatgcttaacgatgcattcttcacgctg
tctggtgctggagcatcgtctaatttcgccaaagcgtcaagcttgagcgcgcgaccatcg
tccctcgtgagctcgatgacagcatgggcaggcgtactcgactgcaaagaaggcagcgca
tgttga
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