Primulina tabacum: 142549809
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Entry
142549809 CDS
T11246
Name
(RefSeq) putative pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142549809
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142549809
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
142549809
NCBI-ProteinID:
XP_075515094
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Position
6:complement(43529085..43531187)
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AA seq
451 aa
AA seq
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MHGTKCNPLIVLFIAFASILPSLRAHYAEFDEVWRRRADEAWNRTLESYEERPEKIVNHL
NMHVHRTLKEIGDDHLSLNSTRRQLTGRRRRYNGPCKATNPIDRCWRCQPNWASNRFRLA
DCALGFGYKAKGGKNGKIYVVTDPSDNNILDPKKGTLRHAVIQKEPLWIIFERDMVIRLT
QELIMQSDKTIDARGARVHVANGAGITIQYVKNVIIHGLRISNIVRGTGGLIRDSVDHFG
LRTMSDGDGISIFGSQDIWIDHVSMTNCYDGLIDAIQGSTGVTISNSHFTDHNEAMLFGA
SDSYSQDQKMQITVAFNHFGKRMVQRMPRCRWGYIHVVNNDYTHWNMYAIGGSQHPTIIS
QGNRYIAPPENPFAKEVTKREYSPESVWKQWTWRSEGDMFLRGAFFVQSGDPIWTSKHPE
VYDKISAAPATHVAEMTRFAGWMNCKLGIPC
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcatggaactaaatgcaaccctttgatcgtcttgtttattgcttttgcttcgattctt
ccgagcctcagagctcattatgcagaatttgacgaagtgtggaggagacgagctgatgag
gcatggaaccggaccctcgaatcctacgaggaacgacccgagaaaattgttaatcacttg
aacatgcatgtccacaggaccttaaaggaaataggggatgaccatttgagcttgaatagc
acaagaaggcagctaacaggaaggaggaggcggtacaatggtccatgcaaggccaccaat
cctattgacaggtgctggagatgccagcccaactgggccagcaaccggttcaggctagcg
gattgtgcgctgggcttcggctacaaggccaagggtggaaagaatggcaagatctatgtg
gtgaccgacccctcagacaacaacattttggacccgaaaaaaggaaccctgcgccacgca
gtgatccaaaaggaaccattatggatcatattcgagcgcgacatggtcattaggctcaca
caagaattgatcatgcagagcgacaagaccattgatgcacgtggcgcgagggtccatgtt
gccaatggcgcggggatcacaattcagtatgtgaaaaatgtgatcatacatgggctgagg
atctcaaacattgtacgtgggactggtggcctgatcagggactctgtcgaccattttgga
ttgagaactatgagcgatggggacggtatttcgatattcggatcgcaggatatctggatt
gatcatgtatccatgacaaactgctacgacggactcatcgatgccatacagggctcgacc
ggtgtcaccatctccaacagccacttcactgatcacaacgaggcaatgctttttggggcg
agtgatagctattctcaagaccagaaaatgcaaataactgttgctttcaaccattttggg
aagagaatggtgcaaagaatgcctcggtgccgatggggttacatccacgttgtgaacaac
gactacactcattggaatatgtatgccatcggtggcagccaacaccccaccatcattagc
cagggaaaccgatacatcgcgcccccggaaaaccctttcgccaaggaggtgacgaagagg
gaatactcaccagaatcagtgtggaaacagtggacatggagatctgaaggcgacatgttc
ttgcgaggtgcattctttgttcagtctggagatccaatctggacgagcaagcacccggag
gtatacgataagatatcagctgctccggcaactcacgtggcagagatgacaagatttgcc
ggttggatgaattgcaagctcgggataccttgttaa
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