Pseudomonas taiwanensis: ICN73_16365
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Entry
ICN73_16365 CDS
T09297
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K12146
hydrogenase-4 transcriptional activator
Organism
ptai
Pseudomonas taiwanensis
Brite
KEGG Orthology (KO) [BR:
ptai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptai03000
]
ICN73_16365
Transcription factors [BR:
ptai03000
]
Prokaryotic type
Helix-turn-helix
Other families
ICN73_16365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_9
PAS
PAS_4
PAS_8
AAA_5
AAA
Mg_chelatase
AAA_16
AAA_22
AAA_2
PAS_3
HTH_8
DUF2148
IstB_IS21
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QOJ89446
UniProt:
A0A7L9GAL2
LinkDB
All DBs
Position
3648030..3649904
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AA seq
624 aa
AA seq
DB search
MTDAVALGVAADSAVAMLLIHPVDDRVLQANNAALDLLGCAANELPGHAFSHFLRGGIAL
WVSFTDEVLTQGEAWSDDLLLVDLQLRQIAVEVAASAVDGGKIVLAVQRRDLLEQRRNRA
EARRQHRLGHVGWERISQVFERIQQQNRLILGAVGEGIYGLDTRGQTTFINPAAERILGW
SAVDMIGQDAHHLFHHSHSDGRAFEVNQCPIHASFSDGQVHRVDHEVFWHKSGEPIAVEY
TSTPIFEMGRLVGAVVLFRDIRERQRTEARLRDALSEVEQLKTRLEMENQYLQEEINAHG
NHHEIVGESPAVKHLLQQIDLVAATDANVLVTGESGTGKELVARAIHASSPRRDRPLIRV
NCAAVPRELFESEFFGHLKGAFTGAVSNRVGRFELADGGTLFLDEVGEIPLELQSKLLRV
LQDRQFEPVGDNRTRAVDVRVIAATNRDLRDMVARGAFREDLYFRLNVFPIRSVPLRERL
EDIPLLASHFLERASLAFNKPGIRMSLTQVAVLQQYAWPGNIRELQNVIERQTIVSRDGR
VSFHEVLAPNGPSSGPVSSIAQCQPEPTADKDWERQMKLNAISVLKRTAGKVSGEGGAAQ
LLGLKPTTLASRLKKWGVDPRDYK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
gtgacagacgccgtcgccctcggagtcgctgccgactccgccgttgccatgctgttaatc
cacccggtagatgatcgggtactgcaagccaacaacgccgcgcttgatttactgggctgc
gccgcaaatgagctgcccggtcatgcctttagccattttctgcgagggggaatcgcactg
tgggtgagctttacggatgaggtgctgactcaaggcgaagcgtggtcggacgacctgctg
ctggtggatctgcaactgcggcaaatagcggtggaggttgcggctagcgcggttgatggc
ggaaaaattgtactggcggtgcagcgccgggaccttctggagcagcgccgtaaccgtgca
gaggcgcgccgccaacaccgtttgggtcacgtgggatgggagcggatcagccaggtgttc
gagcgcatccagcagcaaaaccggctgattcttggtgcagttggcgagggcatctatggg
ctcgatacccggggccagaccacgttcatcaaccccgccgccgagcgtattctggggtgg
agtgccgtcgacatgattggccaggatgcccaccatttgttccaccacagccatagcgac
ggacgtgcgttcgaggtcaatcagtgccccatccatgcttcgttcagcgatggacaagtt
catcgcgtggaccacgaggtgttctggcacaagagcggcgaaccaatcgccgtcgagtac
accagcactccaatcttcgagatgggaaggctggtgggggcggtggtgttgtttcgggac
atccgcgaacgacagcgcactgaagcgcgcctgcgcgatgcgctaagtgaagtagagcag
ttgaagactcggctggagatggaaaaccaatacttgcaggaggaaatcaacgcccacggc
aatcaccacgagatcgtcggcgaaagcccagcggtcaagcatctgttacagcagattgac
ctggtcgcagctaccgacgccaacgtgttggtcaccggcgagtcaggcacgggtaaggag
cttgtggctcgcgcgattcatgccagcagcccccggcgcgaccgccctctgattcgggtc
aattgcgccgcggtgccccgtgaattgttcgagagcgagttcttcggccacctcaaaggg
gccttcaccggagcggtcagcaaccgagtgggtcgctttgagttggcagacggcggaacc
ttgtttctcgatgaggtgggagagattccgctggagctacaaagcaagttgctccgtgtt
ctacaggaccgccagtttgagcctgtaggcgacaatcgcaccagggccgttgatgtgcga
gttatcgccgcaacgaaccgtgacctgcgcgatatggtcgcccgaggggcgttccgggaa
gatttatacttccgcttgaatgtgttccctatacgctcggtgcccttgcgggagcgactt
gaggacattccgttgctcgccagccattttcttgaaagggctagcctggcgtttaacaag
ccgggcattcgcatgtcgctgacccaagtcgcggtgcttcagcagtacgcctggccaggc
aacatccgcgagcttcaaaatgtgattgagcgacagaccatcgtctcccgagacggtcgc
gtgagctttcatgaggttctggcgccaaacggcccgtccagtggcccagtatcttcaatt
gcacaatgccagcctgagccgactgccgacaaagactgggagcggcagatgaagctgaat
gcgatctctgtgctcaaacgaacagcagggaaagtctccggcgagggtggtgctgcgcaa
ttgctggggttgaagcccacaaccttggcgtctcgactcaagaagtggggcgttgatccg
agagattacaaatag
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