Phyllopteryx taeniolatus (common seadragon): 133478327
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Entry
133478327 CDS
T09737
Symbol
cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133478327 (cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptao03019
]
133478327 (cnot1)
Messenger RNA biogenesis [BR:
ptao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133478327 (cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
133478327 (cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
133478327
NCBI-ProteinID:
XP_061630250
LinkDB
All DBs
Position
5:26599389..26652975
Genome browser
AA seq
2395 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVSLISKPNFISTLCYAIDSPLHYQKSLKPSVHLFTQLSKVLK
LSKVQEVIFGLALLNSCSTDLRSFAAQFIKQKLPDLLRSYIDADLGGNQEGGFQDIAIEV
LHLLLSHLLFGQKGASGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGELAKTIMESSLAEFMQEVGYGFCASVDECRNIIHQYGVREVTASQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKNDGSQAHTWNVEVLIDVVKEVNPNLNFKEVTYE
LDHAGFLIRDSKGLHIVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLMSPEVFC
FADYPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGQYEQVKQLFSFPIKHC
PDMLVLALLQISTSWHTLRHELISTLMPTFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
SMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACVTFLKRRCPSIMGGLALDKDQPKSSQLPPETLATMLACLQSCAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRAPSTSSLDAISPVQMDPLTGMGSL
NLGGTATSHTQSMQGFPTSLSSAFSNPQSPAKAFPPLSNTNPSTPFGGIGSLSSQLPGMD
SGPLGSGIGTGIGSSLGMPAVSTDPFGTRKMSTPSLNPPTFQQSKMKASDLSQVWPEANQ
HFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEE
YRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPYGSKMYYFGIAAL
DRFKNRLKDYPQYCQHLASIAHFLQFPHHLQECVQYIEYGQQSRDPPVKMQGSITTPGSL
ALAQVQAQAQSQQPGVPKAPQPGQTSTLVTTTTTTTTAAKTTTITRPTPSSFKKDVPPSI
NTTNIDTLLVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWV
SQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFVKMVLTETYRNIKVLLTSDKAAANFSDRS
LLKNLGHWLGMITLAKNKPILYTDLEIKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSI
VFRPQNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLSLDINDLKPGNLLKDKDKLK
SLEEQLSAPKKEAKPPDEMLPVSTSGDFVPFSAPPSTPAATTTPCTTTGPPTPQFSYHDI
NVYALAGLAPHININANIPLLQAHPQLKQCVRQSVERAVQELVHPVVDRSIKIAMTTCEQ
IIRKDFALDSEESRMRVAAHHMMRNLTAGMAMITCREPLLVSIAANLKNSFAAALRAATP
QQREMMEEAAARVAQENCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCD
PVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQ
AWATDDVAQIYDKCMADLEQHLHAIPQALSMNPLTQALRSLLEAVALARNSRDGIAALGL
LQKAVEGLLDATSGADNDLLLRYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEY
KYNVEAVELLIRNHLVNMQQYDLHLAQSMENGLHYMAVAFAMQLVKLLLVDERSVSHVTE
ADLFHTIETLMRTCAHSRANAPEGLPQLMDVVRSNYEAMIDRAHGGPNFMMHSGISQASE
YDDPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRL
CTEMCVEISYRAQAEQQHNPAASAAIIRAKCYHNLDAFVRLIALLVKHSGEASNTVTKIN
LLNKVLGIVVGVLIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCN
TFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRN
VELNKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMR
LPDPFTPNLKVDMLSEINIAPRILTNFTAVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQ
VSNEPGNRYNIQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTE
GRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWG
LLITFIELIKNPAFKFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7188 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggctttgtctcaaatcagctatctggtggacaatttg
acaaagaaaaactacagagccagccagcaagaaatacaacatattgtaaatcgtcacggt
cctgaggcagacaggcatctacttcgctgtcttttctcacatgtggatttcagtggcgat
ggtaaaagcagcggcaaggattttcaccagacacagtttctgatccaggagtgtgtgtcg
ctcatatcaaagcccaactttatttcgactctgtgctacgccattgacagtcccctgcac
taccaaaagagtttgaaaccatctgtccatttattcactcaactaagtaaagttcttaag
ctcagcaaggtccaagaggtgatatttgggctcgcgctactcaactcctgcagcacagat
cttcggtcatttgctgcacagttcattaagcagaagcttcccgacctcctgcggtcatac
attgacgcagatctcggcggaaaccaagaaggtggtttccaagacatcgctatagaggtc
ttacacctactactatcccatttactgtttggccagaagggagctagtggtgtcggacag
gagcagattgacgcgttcttgaagacactgtgccgagatttcccgcaggagcgctgccct
gtggtgctcgcaccactgttataccctgaaaaacgggacattctcatggacaggatcctg
cctgactcgggggagttagccaagaccataatggagagttctcttgcggagttcatgcag
gaagtaggctacggcttctgtgccagtgtggacgagtgcagaaacatcatccaccagtat
ggggtgagggaggtgacagccagccaggtagccagggtcctgggcatgatggctcgtaca
cactctggcctaactgatggtatccccctacagtccatctctgctcctggaagtggcatc
tggagtgatggaaaggataagaacgatggctcacaggcacacacgtggaatgttgaggtg
cttattgacgtagttaaagaagtgaatccaaacttgaacttcaaagaggtgacgtacgaa
ctggatcacgcaggattcctcatccgggacagtaagggcctccatatagtggtgtacggc
attcagcggggtttgggcatggaggtttttccagttgatctcatatatcggccatggaaa
cacgcagaaggacagttatcattcattcaacactctctaatgagccccgaagtgttctgc
tttgccgactacccttgccacacagtggctatcgacattcttaaagcgccaccggaggat
gacaacagggagattgcaacatggaaaagtctggatttggtggaaagcctccttaggcta
tcagaggttggccagtacgagcaggtgaagcaactcttcagcttccccatcaagcactgc
ccggatatgctggttctggcattgctgcagatctcgacctcctggcacacactgcgccat
gagctcatctctaccctaatgcccacctttctgggcaaccacccgaactctgctatcatc
ctgcactatgcctggcatggacagggccagtctccttccatccgtcagttaattatgcat
tcaatggctgagtggtatatgagaggtgagcagtatgaccaagccaagttgtctcgtatc
ctggatgtggcccaagacttgaagtctctctcgatgctgctgaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgccgtgaatacctcaaacttgataaatgg
ttgactgacaaaattagagagcacggggaaccttttatccaagcttgcgtcacattcctg
aagaggcgatgcccatccattatggggggtctggccctagacaaggaccagcctaaaagc
tctcagttgcctccagagaccttagccaccatgctggcctgtcttcagtcttgcgctggg
agtgtttcgcaagagctgtccgagactatcctgaccatggttgcaaactgcagcaatgtt
atgaacaaagcccggcagccaccacctggagtcatgcctaaaggtcgggccccgagcacc
agcagcctggatgccatttcccctgttcagatggaccctctcacaggcatgggctccttg
aacctgggtggcacggccacctcccacactcagagcatgcagggtttccccacctccctt
agttcagcgttcagtaatccccaatcgccagcaaaggcatttccaccactctcaaacacc
aatccaagcacaccatttgggggtattggcagcttgtcctcgcagctccctggtatggac
tctggtcccttgggctcgggcatcggcaccggtattggttctagtcttggaatgccagca
gtaagcactgatccatttggcaccaggaaaatgagcacaccaagcctgaacccacctacc
ttccagcagagtaagatgaaggcctctgacctttctcaggtttggcctgaggcaaaccag
cactttagcaaggagatagatgatgaagccaacagttacttccagcgcatctacaaccac
ccacctcacccgactatgtctgtggacgaagttctagagatgctacagcggttcaaagat
tccaccatcaaacgggagcgagaagtgttcaattgtatgcttcgaaacttgtttgaggag
taccgcttcttcccccaatatccggacaaggagctccacatcacggcctgcctgtttggt
ggcatcattgagaaaggtcttgtcacctacatggcccttggcctggcactccgatacgtg
cttgaagccttaagaaaaccatacggatctaaaatgtattactttggaatcgcagcccta
gaccggttcaaaaacagattgaaggactacccccagtattgtcaacatcttgcatcaatt
gcacattttttgcaatttccccaccatttacaagagtgtgtgcagtatattgagtatggc
caacagtcacgggaccccccggtgaagatgcaaggctccatcaccaccccaggcagtctg
gcgctggcacaggttcaagcccaagctcaatcacagcaacccggtgtcccaaaagcaccg
caaccaggacaaacgagcaccctagtcacaaccactacgaccactaccaccgctgctaag
accactaccatcacaaggccaacacccagcagcttcaagaaggatgtgcctccctccata
aacactacaaatattgacactctactggtggctactgaccaaacagaaaggattgtagaa
cctccagagaatgttcaagagaagattgcgttcatcttcaataacctttctcagtcaaac
atgacacaaaaggtagaggagttgaaagagaccgtgaaggaagagttcatgccatgggtg
tctcagtatctggtgatgaagcgtgtcagcattgagcctaattttcacagtctttactcc
aactttctggacacactgaagaatcctgagtttgtcaaaatggtcctcacggagacgtac
agaaacatcaaggttttgttgacatctgacaaggctgctgccaatttctctgatcgctca
ttgctgaagaacctgggccactggctgggcatgattacactggccaaaaacaagcctatt
ctctatacagatctggaaattaagtctctgctactggaagcctatgtgaaaggccagcag
gagctcctttacgtagttccctttgtggccaaagttttggagtccagtctgcgaagcatt
gttttcaggccccagaacccttggaccatggccatcatgaatgttctcgctgagctacat
caagaacatgacctcaagcttaacctaaaatttgagattgaagttctttgtaagaacttg
tctctggacatcaatgacctgaagccagggaacctgttgaaggacaaggacaagcttaag
agtcttgaggagcagctgtctgcaccaaagaaagaagcaaagcctccagatgagatgctc
ccagtttctacatcaggagactttgttccgttttcagcaccaccctccacaccagctgcc
accaccaccccttgcacaaccacggggccccccaccccacaattcagttatcacgacatt
aatgtgtacgccttggcaggcctggcaccacacattaatataaatgccaacatccctctt
ctacaagcccatcctcagttgaagcagtgtgtgaggcaatcagttgagcgcgccgtccag
gagctggtgcatcccgtggttgaccgctctatcaaaatcgctatgacgacatgtgagcaa
atcatccggaaggacttcgctctggattcagaggagtcccgcatgcgtgtggcggcacac
cacatgatgaggaacctgactgccggcatggccatgatcacctgtcgagagcccctactc
gtcagcattgccgctaatctcaagaacagttttgcggctgcgctaagggcggcaactccc
caacagagggaaatgatggaggaggctgcagcgagggttgctcaggagaactgtgaactg
gcatgttgctttattcagaagaccgctgtggagaaggctggccctgaaatggacaagagg
cttgccacggaatttgaactcaggaagcatgcacgccaagaagggcgccgttactgtgat
ccagttgttttgacttaccaggctgaacgtatgcctgagcagataagactaaaggtggga
ggagtcgacccaaagcagcttgctgtgtatgaggagtttgcaaggaatgttcccggtttc
ttacccagtaatgatctttctcaaccaacggggttcctggctcagccaatgaagcaacaa
gcgtgggccacggatgatgttgcacaaatctatgacaagtgcatggcagacttggagcag
catcttcacgccatccctcaggcgctttccatgaaccccctgacccaagccctgcgcagc
ctgctcgaggctgtggccttggcaagaaactccagggatggtattgcagctcttggactg
ctgcagaaggctgtggaaggccttctggatgccacaagcggggctgataatgacttgctt
ctccgttatcgggagtgccacctgctggttctgaaagccctccaggatgggcgcgcatac
ggaccacagtggtgcaacaaacaaatcaccaggtgtctgattgaatgccgggatgagtac
aagtacaatgtcgaggcggtggagcttttgatccgaaatcatcttgtgaatatgcagcag
tacgatctgcacctagcccagtcaatggaaaatggactccactacatggcggtggcattt
gccatgcagttagtgaagctcctgctggtggatgagcgcagtgtgagccatgtcactgaa
gcggatctcttccacaccattgagactttaatgaggacctgtgcgcactctcgagcaaat
gcgccagaaggtcttccccagctgatggatgttgttcgctccaactacgaggccatgatt
gaccgggcccacggtggtccaaacttcatgatgcactctgggatttcccaggcttcggag
tacgatgatccccccggcctgagggagaaggcggagtatcttctgagggaatgggtcaac
ctgtaccactcggctgctgctggccgggacagcaccaaagcattctctgcctttgttggc
cagatgcaccagcagggtatcctgaagacggacgacctgatcacgcgcttcttccggctt
tgcaccgagatgtgtgtggagatcagttaccgcgcacaggctgaacaacagcacaaccca
gcagccagcgcagcaatcatcagagcaaagtgctaccacaatctggacgcctttgttcga
ctcatagctctcctcgtcaaacactctggagaggcctccaacaccgtgaccaagatcaac
ctcctcaacaaggtgctgggaatcgttgttggggttttgatccaggaccatgatgtccgt
cagacggaattccagcagctgccctaccaccgcattttcatcatgctactgttggagctc
aatgctcccgagcacgttctggagaccatcaacttccagacgctcaccgccttctgcaac
acctttcacatactgagacccaccaaagcacccggttttgtgtacgcttggcttgaactg
atctcccatcgcatcttcatcgcccgcatgcttgcgcacacgccacagcagaagggttgg
cccatgtatgcacagttgctcattgatctgttcaagtacctggcacctttcttgcggaat
gtagagctcaacaaacctatgcaaatcctctacaagggcacactgagagtactgctggtc
ctgttgcatgacttcccagagttcttgtgtgattaccattatgggttctgtgacgtgatc
ccacccaactgcattcagctacgcaacctcatcctgagtgcctttccacgcaacatgagg
ctccctgaccctttcacacccaatctcaaggtggacatgctgagtgagatcaacatcgct
cctcgcatcctcaccaacttcacagctgtcatgccttcccagttcaagaaggatttggac
tcctatctcaaaacacgttctccggtcactttcctctcagagctgcgcagcaatctacaa
gtttcaaatgagccaggaaaccgctacaatatccagctgatcaacgccttagtgttgtat
gtgggcacgcaggccatcgcgcacatccacaacaagggcagcacgccctccatgagcacc
atcacccactctgcacacatggacatcttccagaacctggctgtggatctggacacagag
ggacgttacctgttcttgaacgccatcgccaatcagctgcgctacccgaacagccacacg
cattatttcagctgcaccatgctctatctgtttgctgaggcaaacacagaggccatccag
gagcagatcaccagggtcctgttggagaggctgatcgtgaaccggcctcacccatggggt
ctcctcatcaccttcatcgagctcatcaagaatccggccttcaagttctggagccatgac
ttcgtgcactgtgcccccgagattgaaaagttgttccagtcagtggctcagtgctgcatg
ggccagaagcaggcccagcaggtgatggaaggaaccggtgccagctag
DBGET
integrated database retrieval system
