Candidatus Phycorickettsia trachydisci: phytr_3970
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Entry
phytr_3970 CDS
T05372
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ptc
Candidatus Phycorickettsia trachydisci
Pathway
ptc00470
D-Amino acid metabolism
ptc00550
Peptidoglycan biosynthesis
ptc01100
Metabolic pathways
ptc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
phytr_3970
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
phytr_3970
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
phytr_3970
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptc01011
]
phytr_3970
Enzymes [BR:
ptc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
phytr_3970
Peptidoglycan biosynthesis and degradation proteins [BR:
ptc01011
]
Precursor biosynthesis
Amino acid ligase
phytr_3970
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp
ATP-grasp_4
RimK
ATPgrasp_Ter
CPSase_L_D2
ATPgrasp_TupA
Motif
Other DBs
NCBI-ProteinID:
AVP87348
UniProt:
A0A2P1P7V1
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All DBs
Position
complement(440665..441627)
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AA seq
320 aa
AA seq
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MNILQTKFKEKSTVLESLDLKGKKKVAVLAGGMSAERDVSLQTGQNIVQALKELGHNVIS
IDPGADLSDVLSHIKPDVVFNALHGTYGEDGCIQGLLNMMQIPYTHSGVLASSVAMNKLQ
TRRILDHLHQILFPKFYIVHKNDNLKNDPIPRPYVIKPLSQGSSIGINIIHSEDDFNFTK
YNFPYGNELIVEEYIKGREINIAVLNGKALGILEIVVTKGEFYDYTAKYSNGYTKHVEPH
DLTKEEKNHVLKLSEDIYQTLGCNGITRVEFLYKEGKFYFLEINTHPGMTNLSLCPEIAM
QSGINFNSLVEQILDSAKYE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttgcaaacaaaatttaaagaaaaaagtactgtactggaatcacttgatctt
aaaggtaaaaagaaagtggcggtattggcaggagggatgtctgcagaaagagacgtatct
cttcaaaccggacaaaacattgttcaagcattaaaagaattaggacataacgtaatatct
atagatcctggcgctgatcttagcgatgtattaagtcatataaaacccgacgtggttttt
aatgcgctacacggtacttatggagaggatggatgtatacaaggtttgcttaatatgatg
caaatcccttacactcattcaggagtgctagcttccagcgttgctatgaataagctacaa
acaagaagaattcttgatcatctacaccaaatcctttttcctaaattttatatagtgcac
aagaatgacaatcttaaaaatgatcctataccacgtccatatgttattaagcccttatct
caaggttctagtataggtattaatatcattcattctgaagatgattttaatttcacaaaa
tataatttcccatatggaaatgagttaatagtcgaggaatatatcaaaggaagagaaata
aatatcgctgttttaaatggtaaagccttgggcattcttgaaatagttgttacaaaaggt
gaattttatgattatacggctaaatattccaatggctatacaaaacacgttgaacctcat
gatctaacaaaagaagaaaaaaatcatgttttaaagctttctgaagatatatatcaaact
ttaggttgcaacggtattacaagggttgaatttttatataaagaaggaaagttttatttt
cttgagattaacactcatccaggtatgacaaatctttctttatgtccagagattgcaatg
caaagcggaattaattttaatagtcttgtagaacaaattcttgattctgctaagtatgag
taa
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