Pseudoalteromonas tetraodonis: PTET_a2917
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Entry
PTET_a2917 CDS
T05282
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ptd
Pseudoalteromonas tetraodonis
Pathway
ptd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PTET_a2917 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptd03019
]
PTET_a2917 (recQ)
03400 DNA repair and recombination proteins [BR:
ptd03400
]
PTET_a2917 (recQ)
Enzymes [BR:
ptd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PTET_a2917 (recQ)
Messenger RNA biogenesis [BR:
ptd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PTET_a2917 (recQ)
DNA repair and recombination proteins [BR:
ptd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PTET_a2917 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
HEM4
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ATD04184
LinkDB
All DBs
Position
I:2807743..2809566
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AA seq
607 aa
AA seq
DB search
MNTLTPSPNTLVRKPETVLKQVFGYSEFRDGQSAVIDAAINGQDSLVLLPTGGGKSVCYQ
IPALVLEGVTIVISPLISLMQDQVTQLQALGVKAAYVNNSLAREEQQLVYQQLHQGLIKL
LYVAPEKVLQRDFLERLSHLNVSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMM
ALTATADKATRFDIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRYLKEQKNQS
GIIYCTSRKRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGM
GINKPNVRFVLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDDE
QRRRVEEQRFNAMASFAEAQTCRRQILLNYFSEYQREPCGNCDICLNPPKSFDGTLVAQQ
ALSCVYRAQQRFGLGYIVELLRGANTSRIRDNNHHELSTYGIGKDKSSEFWLSILRQLIH
QGLLSQDITQGASLRLTEAARAILKGEYALQLAEPRLQAKHVYQDKLAQFNYDKKLFARL
RALRKELADADDVPPYVVFNDKTLAEMAQLMPTNDSEFLKVSGVGFTKLNKYGGEFLTAI
RHYLATQ
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaatacactaactccttctcctaatacgcttgtgcgtaaacccgaaactgtactcaaa
caagtgtttggttacagtgaatttcgcgacggtcaaagtgcagtaattgatgccgctatt
aatggccaagattcattagtattactgcccaccggtggtggtaaatcggtgtgttaccaa
atacccgcgttggtattagagggagtcaccattgttatttctccgctgatctctttaatg
caagatcaagtcacccagttacaagcactgggagttaaggccgcttatgtcaataacagc
ctagctcgcgaagaacaacaattagtgtatcagcaattgcatcaagggctgataaagcta
ctttatgtagctcctgaaaaagtgctacaacgcgactttttagagcggctctctcatttg
aatgtgagcttgtttgctattgatgaagcacactgtgtttctcattggggtcacgatttt
agaccgcattattttcgtttaaatgagcttaaacaacgctttgcacatgtgcctatgatg
gcactcactgccactgccgataaagcgactcgctttgatattgttgagcaactcaagcta
caacagccctacattcataccggcagttttgatcgccctaatattcgttacaccatagaa
gaaaaatttaaacctatggtgcaattactacgttatttgaaagagcaaaaaaatcaaagc
ggtattatttattgcaccagccgcaagcgagttgatgacattgctgaaaagcttgccgat
gcaggtcttaatgcggcggcttatcatgcgggaatgagcaacgaacagcgtcaatttgtg
caaactggatttgcccgcgacgatattcaaattgtggttgccaccgttgcctttggtatg
ggaattaacaagcctaacgtacgttttgtattacattacgacattccaaaaagtattgaa
gcgtattatcaggaaaccggtcgcgctggacgtgatggactcgctgcagaagccattatg
tattttgaccccgctgatataggtcgggttagacgcttttttgaagatattgacgatgaa
caacgccgccgcgtagaagagcagcgctttaatgccatggccagctttgccgaagcacaa
acgtgtcgtcgtcaaatattattgaactactttagtgagtaccaacgcgagccctgtggg
aactgtgacatttgcttaaatccacctaaaagttttgatggcacattagtcgcacagcaa
gcgctttcatgtgtgtatcgcgcgcaacaacgatttggattgggttacattgtagagtta
ttacgcggcgcgaatactagccgcattcgtgataacaatcaccatgaacttagtacctat
ggcataggtaaagataaaagcagtgaattttggcttagtattttacgccaacttattcat
caagggctattaagccaagatataacccaaggcgcttcattgcgtttaactgaagctgca
cgcgctattttaaaaggtgaatatgcgctgcaattggccgagcctcgcttacaagctaaa
cacgtttatcaggataaattagcgcagtttaattacgataaaaaactattcgctcgcctg
cgtgcattgcgtaaagagttagccgatgccgatgatgtgccgccttatgtagtatttaac
gataaaacgctagccgaaatggcgcagcttatgcccactaacgacagtgaatttttaaaa
gtgtcgggggttggttttactaaattaaacaagtatggcggtgagtttttaaccgcaatc
cgacattacctagcaacgcaataa
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