Pyrenophora teres: PTT_06506
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Entry
PTT_06506 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pte
Pyrenophora teres
Pathway
pte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PTT_06506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pte03019
]
PTT_06506
Messenger RNA biogenesis [BR:
pte03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PTT_06506
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PTT_06506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
Prion
Motif
Other DBs
NCBI-ProteinID:
EFQ95490
UniProt:
E3RFK5
LinkDB
All DBs
Position
Unknown
AA seq
2295 aa
AA seq
DB search
MSLQHPWGAPRQNQSTRLTPITTASAHDPRNTNTPSPNHPRANQSPITSSFPALPPASSR
LVGSRKSSVASSTSSPYTPAAGQQLPASQLLSSRGTRTIASQAASQLASSAAAATQGAGA
QSNSGGGTSKLVRASPSLSISSTTGSPSTSANSSGASSQNLSRIVIAQIFLLLSQFGPVK
DDKDRAKWDTQTEQIRKLVDSNGMEVFSKYFRRVLQNNAATIFGTATRSPDAPNGSYQIL
LTEVHKIRQDPEQADKIAESISSSEGDLFRDFDLAAFLSHFKLDLISKTMLALACRKTDL
RSKADAVLSTVGDDLLVTIAQPAEDDMSPEYVATLVERLLQDPPPGWDEDKKMSLAYAVQ
MHYQQLQQAIPGVVESRLILVELTDGSRNPLVKLVRQAGPQGTATVEACKEVLASAETRD
ISYQQISAVLLYLALSTGYNAKNFVAALREHRAGQRIDWQDVVLAFDRDHLRIERHQFLA
IYNALLPVAQDTEKFDIQALWGGQWQHNLTQLYFVVAFLSSTPQELDVTQIPRLRTSYSM
KTFENASDNAKAFAEQAVKHPFVSLDATAALFNMIFQTSETYHTAQLMSIPEQVINPHTA
EFLVAAAAVPKPWGALQEQALKQLFDPYFHKKLPIYNFVLYGLWQQDMQWLVDRFVDAYN
ADSMTLTLVLEHAEANHWLEPLIRSNTDISLDLAAQAHARGKFEVEPWLQQTFDQAGPLF
RRILTNFLSARAQEEMQRVRDDHQPLSLPLAVKTVYPLLWFLAECGLPEHELLPLQRNCI
QAYPRLINYGEGVDDVIDANGQNGNALPEDADKKMQEHFKNMYSGESDVRDIISALKKYK
ESRDPADQDLFACMIHGLFDEYNCFGEYPLEALATTAVLFGGIINFNLLSRIALQVGLAM
VLEAVQEFRPEDSMYKFGLQALIHFSNRLSEWPNYCDQLLIVPGLQGTEIFVKAEEVVGQ
QVGEVNGDGHNGIGLTNGNGIEDTIHQEPAVPKFTCLYVDPPLRPELYEDPDEEVQDKVL
FVLNNVSERNLRDKINDLTEAVEERHHQWFANYLVEERAKMQPNFQQLYLDMLELFNDKM
LWAEVLRETYASVIRMLNTDSTLGSTERGHLKNLGSWLGSLTIARDQPIKFRNISFKDLL
HEGYDTDRLLLVIPFTCKVLVQAAKSSIFKPPNPWLTEMLGVLMELYHFADLKLNQKFEI
EVLCKGLELDHKDIDPTNTIRGRPPADEEFLGAMVTDGMEAFGDLSIMSLNRGARGPNER
FSSAAITAALPDFTNQLQYPPPGNGAVPPAALKKIFLTAVNQAIQEIIAPVVERSVTIAA
ISTSQLINKDFAMEPDEEKLRNAAHTVVKALSGALALVTCKEPLRMSIQNNIRVTARDLP
DQGLPEGHILMFVNDNLDLVCNTVEQAAEMSSLAEIDMQIEDAIRMRRMFRSSRPNEAFK
DANISPWAFYIPEPYRQMPGGLNREQLSIYEEFGRQSRGAPHVNNPSQDGGRQLPDVLQD
QFAAAVPNLPTPGAAPAEPRQPAQQPRLQNLQAPHTALTQQQQPNGYMEAPGLERGQRGT
DDLLIELTRVVKEAPEERISDLQPGSSNVHQVFDQLVSSVEYAGPNKESFAFRIAGQVTN
HLFSDSLSRLEVEVMAHLLSHLCQLSVQTSRQVLMWLATLHEDDRIFKSTVMVALMEVNL
MDMHRLNTTIAKAIQDRRVAAVEMLSSLMDELILNEHPSAFRADFAMSIDALTVWLAEEP
TFELGKRILANLQAPSNEQLLTPPGTGHKDQLEYVFDEWVHLQMESMPKKTVGAFIYQLH
QQKVMETQESSIVFIRTCIDASVVAYEQEHSLPFGSGNEDIATVKIDALGRLIVDLVVYQ
GEQGEQGGAVKENKAKYLDQILVVVVLVLCNHHNIRGDAFCQKVFFRLFSAILFHLNDAV
KEEALEDQKADVFLAVARALLALQPLRVQRFTFAWLSLVAHRIFIPAMLEEGQDDKRWDV
YAQLVETLLTFTGKLIKPTGETLMAQQFYRGVLRVLLVIHHDFPEFLVENHFRFCNSIPM
HCTQLRNLIVSAYPSTILEMPDPFTAGLKADRLEHDLQAPVIRADIAGILSEAGIKGAVD
NLLKGSELKNQDVDKVRQAVYYSEAKSAGFELVPTTANPKLIHAITLYIGISTLGAGSAS
APIFDAESPATKAIERLVKDLHPEARFHFISAIANQLRFPNTHTHFYSYTLLHLFGPPND
DSLALEIQETIIRVLLERLLVHRPHPWGLIITLLEILKNRTYGFWDLPFVKAAPEVERLL
NALFTHAQQSPRPLA
NT seq
6888 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcaacacccctggggcgccccgagacaaaatcaaagcacacgcctcacgccc
ataaccactgcctctgcccacgacccgcgcaacacgaacacgccctcacccaaccacccc
cgcgccaaccaatcgcccataacctcgtcattccccgctctgccgcccgcatcttcgcgc
cttgttggtagccgcaagtcgtcggttgcctcgtcgacgtcgtcgccctatacgcccgca
gcaggacagcagctccccgccagccagctgctgtcctccagagggaccaggaccatagcg
tcccaggctgcctcgcaactggcttcctccgccgccgccgctactcagggcgccggtgca
cagtcaaacagcggcggaggaacctccaagcttgtccgcgcctcgccctcgctctccata
tcgagcaccacgggctcgcccagcacgtcggccaattcctctggcgcttcatctcagaac
ctttcacgcattgtcattgcccaaatcttcctcttgctgagtcaatttggcccggtaaag
gacgacaaagatcgcgccaagtgggacacgcaaaccgagcagatcaggaagctcgtcgac
tcaaacggtatggaggtcttttcaaagtactttcggcgtgtgctgcagaacaatgcggcc
accattttcggtaccgccacacgcagccccgatgctcccaatggcagctatcagatcctt
ctcacagaagtacacaagatacggcaggatcctgagcaggcagacaagattgcagagtca
attagctccagtgagggcgacttgttccgcgacttcgacttagcagccttcctctcgcac
ttcaagctcgacttgatttcaaagacgatgctcgcacttgcatgcagaaagacagatctg
cgctccaaagccgacgcagtcctgtccacggtaggcgacgacctgctcgtgaccattgcg
caaccggccgaagacgatatgagccctgaatacgtcgccactctcgtcgaacgtctactc
caagatccacccccaggatgggatgaggacaagaaaatgagtctggcatacgctgttcag
atgcactaccagcaactccagcaggcaattccaggcgtggtcgaatcaaggctgatcctc
gtcgaactcacagacggctcgcgaaacccccttgtcaaattagtcaggcaggcaggacca
caaggcacggcgaccgtcgaggcatgcaaagaggtgcttgcgtcggccgaaacgcgcgac
atcagttatcagcagatttccgccgttttgctttacctggccctctccactggctataat
gcgaaaaactttgtagcagcgttacgcgaacaccgggccggacagcgaatagactggcaa
gacgtcgtgcttgctttcgatcgagaccatctacgcatcgaacggcatcaattcctcgcc
atttacaacgcactgctcccagtcgctcaggacaccgagaagttcgatatacaggcgctt
tggggagggcaatggcagcacaacctgacgcagctgtactttgtcgtggcttttctgtct
agtacaccgcaagagctagacgtgacgcagattccccgattacgcacctcgtactcaatg
aagacattcgagaatgcttcagacaacgccaaagcctttgctgaacaagcggttaagcat
ccgtttgtttccttggacgcaacagccgcgcttttcaacatgatcttccagacatcggag
acatatcatacagcacaattgatgagcatacccgaacaagtgattaaccctcatacggcg
gagttcctcgttgcggcagcagcagttccaaaaccatggggtgctttgcaggaacaggcg
ctgaagcagcttttcgacccctatttccacaagaaacttcccatctacaacttcgtgctc
tatgggctttggcaacaggatatgcaatggctcgttgatagattcgtcgatgcctacaac
gcggactccatgactcttaccctggtccttgagcatgccgaagctaaccactggttagag
ccactgattcgcagcaatactgatatcagcctagacttggctgcgcaggcgcatgcgcgt
ggcaagtttgaagttgagccctggttacagcaaacattcgaccaggctgggccgctattt
cgtcgcatcttgaccaacttcctgagtgcacgcgcccaagaagaaatgcagcgtgtacga
gacgaccatcagcctctcagtcttcctctagctgtgaagacagtctacccactgctttgg
tttcttgccgaatgtggcctacctgagcatgagctgctgcccttgcagcgaaactgtatc
caagcctatcctcggttgataaactacggcgaaggcgtggatgacgtaatcgatgcgaac
ggccaaaacggcaatgcgcttccagaagacgccgataaaaagatgcaagagcatttcaag
aacatgtacagtggtgagagcgatgtcagggacatcatctctgcacttaaaaagtacaaa
gaatcccgcgatcccgctgatcaggacctctttgcgtgcatgattcatggtctcttcgac
gagtacaactgttttggcgaatacccgctagaagcactagcaaccactgctgtgcttttc
gggggtatcatcaatttcaaccttctatcgcgaattgcacttcaagttggactggcgatg
gttttagaagctgtgcaggagttccggcctgaagacagtatgtataagttcgggctccag
gcactcattcacttctcaaaccgactatcggaatggcccaactattgcgaccagctgctc
attgtccctggactccaaggaactgaaatatttgtcaaggccgaagaagttgtaggtcaa
caagttggagaagttaatggtgatggacataacggcataggcctaaccaacggcaatggc
atcgaggataccattcatcaggaacccgccgtacccaagttcacatgtctctatgttgat
ccaccactccgtccagagctgtacgaggaccctgacgaggaagttcaagacaaggtattg
tttgtactgaacaacgtgtccgaacgtaacttgcgtgacaagatcaacgacctcactgaa
gctgtcgaggagaggcatcaccagtggttcgcgaattaccttgttgaggagcgtgccaag
atgcagcccaacttccagcagttgtatctcgatatgctcgagctattcaacgacaagatg
ctctgggcagaagtacttcgcgagacgtacgcaagcgtcattcgtatgctcaacactgac
tctaccttgggttctaccgaacgtggtcacctgaagaatttgggctcttggctcggatct
ctgaccatcgcccgggaccagccgatcaagttccgaaacatttcgttcaaagacctgctg
cacgaaggctacgatacagaccgtctgctgctcgtgatacctttcacttgcaaggtcctg
gtgcaggctgccaagtcctctatatttaagcctcctaatccatggctgacagagatgctg
ggggtgcttatggaactctatcactttgccgacctgaaactcaatcagaagtttgagatt
gaagttctatgcaaaggcttggagctcgaccacaaggatattgatccgacaaacactatc
cgagggcgacccccagcggatgaggagttcttgggtgcgatggtcactgacggcatggaa
gcgtttggagatctctccatcatgagcctgaatcgtggtgcaagaggccccaacgaacgc
ttctcgtcagctgcaatcacagcagctctgccagactttaccaaccagctccaataccca
ccacccggaaatggcgcagttcccccagcggcactaaagaagattttccttactgctgtc
aaccaagccatacaggagatcattgcgccagtagtggaacgctcagttactattgccgct
atctccacgtcgcaattgatcaacaaggatttcgctatggaaccagacgaggagaagctc
cgcaatgcggcgcacactgtggtcaaggctctatctggtgccctagctctcgtcacctgc
aaagagcctctacgcatgagcattcaaaacaacattcgcgtaacagcaagggatctgccc
gaccaaggacttcccgagggccatatcctcatgtttgtcaacgacaacctcgaccttgtc
tgcaacactgtagagcaggctgccgaaatgtcatctctcgctgaaatcgatatgcaaatc
gaggacgcaattcgcatgcggcgaatgttccgcagttcccgccccaatgaggctttcaag
gacgccaacatcagcccctgggccttttacatccctgagccgtacaggcagatgccgggt
ggcttgaacagggaacaactgtccatttatgaagagtttggtagacagtcgcggggtgct
ccacacgttaacaatccatcacaggatgggggccggcagcttccagacgtacttcaagac
cagtttgcggcggcagtgccaaaccttcccactccaggtgctgcaccagcagagcctcgg
caaccagcacaacagcctcggcttcagaacctccaggcaccccacacagccttaacgcaa
cagcaacaaccaaatggctacatggaggctcctggtctggaacgtggccagcggggtacg
gacgatcttctcattgagcttacccgcgtcgtcaaggaggcaccagaggaacgcataagc
gaccttcagccgggaagcagcaacgtccaccaagttttcgatcaacttgtttctagcgtt
gagtatgctggacctaacaaggaaagttttgcattccgtattgccggtcaagtgaccaac
caccttttctccgactcattgagccgtttggaagtcgaggttatggcgcatcttttgagc
cacctgtgccagttgtccgtgcagacttcccgtcaagtgctgatgtggttggccaccctc
catgaagacgaccgtatcttcaagtctaccgtcatggtggctcttatggaagtcaacctc
atggatatgcatcgcctgaacacgaccattgcaaaggccattcaggatcgccgcgtcgcc
gcggtagagatgctttctagcctgatggacgagctcatattgaacgagcacccgagtgcc
ttccgtgcggactttgccatgtctattgatgctcttaccgtctggttagcagaggagcct
accttcgaacttggcaaacgcattctcgcaaacctgcaggcaccatccaacgagcagtta
ctgacccctccagggaccgggcataaggaccagctcgagtatgtattcgatgagtgggta
catctccaaatggaaagcatgccaaagaagacagtgggcgctttcatctaccagctccat
cagcagaaggtcatggagacccaagaatcttctatagtattcattcggacctgcattgat
gcctccgtcgtcgcgtacgagcaggagcattcgcttccgtttggcagtggcaatgaagac
attgcaactgtcaagattgatgcgcttggacgattgatcgtcgatcttgttgtctaccaa
ggtgagcagggcgagcaaggcggagccgtcaaggagaacaaagcgaaatacctggatcag
atactcgtcgtggtcgttctcgttctctgcaaccatcacaacattcgaggagacgccttc
tgtcaaaaggtcttcttcaggctcttctctgctatcctgttccacctcaatgatgcggtc
aaggaagaagctttagaagaccaaaaggcagacgttttccttgcagtggccagggctctc
ctagctctccagcctttgcgtgttcagcgattcacctttgcgtggctttcactggtcgca
caccgcatctttattcctgccatgttagaagagggtcaagacgacaagcggtgggatgtg
tacgctcagcttgtggagacgcttctgacttttactggaaagctcatcaagccaacggga
gaaacacttatggctcaacaattctaccgtggtgtcttgcgagttctgttggttatacac
catgactttcctgagtttcttgtcgagaaccactttcgcttttgcaacagcatccctatg
cactgcacacagcttcgaaacctcatagtcagcgcatatccttcaacaatccttgagatg
ccagatccgttcaccgcaggactgaaggcagaccgtctggagcatgatcttcaggcacca
gtcatccgtgccgatatcgcaggtatcctttcagaggcaggcatcaaaggcgccgtcgac
aacctgctcaagggttcagagctgaagaaccaggatgttgacaaggtccgtcaagcagtc
tactattcggaggccaagtctgccggtttcgagctcgtcccaacgactgcgaacccgaag
ttgatacatgcaatcactctgtacattggcatttcaactttaggcgctggttcagccagt
gcacctatctttgatgccgagagcccagctacgaaggctattgaaaggcttgtaaaggac
ttgcaccctgaagcaaggttccactttataagcgcaattgcgaaccagctgcggttcccc
aacacacacactcatttctacagctacacgctgctgcacctcttcgggcctccgaatgac
gactcgttggctctggagattcaagagacaatcatccgagtgctgttggagcgcctgttg
gtccatcgcccgcacccatggggcctcatcatcaccttgctggagattctcaagaaccgt
acatacgggttctgggacctgccatttgtcaaagcggcacctgaagttgaacggcttctc
aatgccctctttacgcacgctcagcagagcccacgaccgctagcctaa
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integrated database retrieval system
