Pyrenophora teres: PTT_11005 Help Entry PTT_11005         CDS       T01613                                  Name (GenBank) hypothetical protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism pte  Pyrenophora teres Pathway pte03020   RNA polymerase pte03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pte00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     PTT_11005   09124 Replication and repair    03420 Nucleotide excision repair     PTT_11005  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pte03021]     PTT_11005    03400 DNA repair and recombination proteins [BR:pte03400]     PTT_11005 Enzymes [BR:pte01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      PTT_11005 Transcription machinery [BR:pte03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      PTT_11005 DNA repair and recombination proteins [BR:pte03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       PTT_11005 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 RNA_pol_Rpb2_4 OrfB_Zn_ribbon Motif Other DBs NCBI-ProteinID:  EFQ92000 UniProt:  E3RQK0 LinkDB All DBs Position Unknown AA seq 1262 aa AA seqDB search MADYDQYEDEGMDEYEDEEDRVLPEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIV KENGSVILEQNQPYNPDEEDNPIIKRRYEMKFGRVYLARPTHTEGDGTTVQLYPHEARLR NLTYSGAMLADIENRVMVAREGRDPEADDDEEMEGGYTGGQNQIRWERENMSSDDGAAAR VFIGKLPVMLRSELCHLRAQSDADLFALNECPYDQGGYFVINGSEKVLIAQERSAANIVQ VFRKKQGPIPWIAEIRSAVEKGTRLISSFNIKWAENSLAGPGKRIPGPFAYATLPYIKAD VPMAIVFRALGIVSDEEILSHIVFDRNDTQTLELLKPSIEEGSVVQDRETALDFIAKRGA NSGTRDRRLKFARDIMQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDDRDH FGKKRLDLAGPLIANLFRILFLKLTKDVYKYLQRCVENNQDFNVQMAVKASTITNGLKYS LATGNWGDQKKAASAKAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHNSHWG LVCPAETPEGQACGLVKNLSLMCYVSVGSDATPIVDFMTQRNMQLLEEYDQNQSPDATKV FVNGVWVGVHSNAQQLVTVVQELRRNGTLSYEMSLIRDIRDREFKIFTDAGRVMRPLFVV ENDVRKPNRNHLIFTKEISNKLKSEQMEASQRQGWSEEEVEQATYGWRGLIQDGVVEYLD AEEEETAMITFSPEDLEEWREMKMGLPMTDHSLEGSQRLRRLKPLPDPRIHSYTHCEIHP AMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVALTNFALRMETMMNVLYYPQKPLAT TRSMEYLKFRELPAGQNAIVAIATYGGYNQEDSVIMNQSSIDRGLFRSLFYRAYTEQEKR IGVNVLEQFEKPTRADTLRLKGGTYDKLDDDGVVAPGVRVSGDDIIIGKTAPIATDAAEL GQKTTLHTKRDVSTPLRSTENGIVDQVLFTTNTEGLRFVKVRTRTTKVPQIGDKFASRHG QKGTIGITYRQEDMPFSREGLTPDLIINPHAIPSRMTIAHLVECLLSKVGAITGQEGDAT PFTDVTVDQVSQLLENAGYQKRGFEIMYNGHTGKKMRTQIFLGPTYYQRLRHMVDDKIHA RARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCDI CGLMSPIANLKKNLYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTDRSGLSV RD NT seq 3789 nt NT seq  +upstreamnt  +downstreamnt atggccgactatgatcaatatgaagatgaaggcatggacgagtacgaggatgaggaagac cgcgtcctgcccgaggactgctgggcagtcatcagctccttcttcgacacaaagggtctg gtgtcgcaacaactcgactcatatgacgaatttacccgaaacacaatacaagacattgta aaagagaatggcagcgtgatcctcgagcagaaccaaccttacaaccccgatgaagaggac aacccgattatcaaacgccgctatgaaatgaaattcggacgcgtttaccttgcgcgcccg acacataccgaaggcgatggcacaactgtgcaattatacccccacgaggcgcgtctgcgc aacctcacttactcgggcgccatgttggccgacattgagaaccgtgtcatggtcgcccgc gagggacgtgaccccgaggccgacgacgacgaagaaatggagggtggatacacaggaggg cagaatcaaattcggtgggagcgtgagaacatgtcctcggacgatggcgctgcggcccgt gtcttcatcggaaagttgcctgtgatgctgaggtccgagctctgccacctgcgagcccag tccgatgctgatctgttcgcgctcaacgaatgtccctacgatcagggtggctactttgtt atcaacggtagtgagaaggtgctgatcgcccaggagcgcagcgcagcgaacatcgtacag gtcttccgaaagaagcaaggtcctattccatggatagcggaaattcgaagcgcagtcgaa aagggcacccgtctgatttcctccttcaacatcaagtgggctgagaactcgctcgccggc cccggcaagcgtatacctggaccctttgcatacgccaccctcccttacatcaaggcggat gtgccaatggccattgtcttccgtgcgctcggaattgtttccgacgaggaaatcctgagc cacattgtcttcgaccgcaacgacacacaaaccttggagctgttgaagcccagtattgag gagggttcagtcgtgcaagacagggagacggctctggacttcatcgccaagcgtggtgca aactccggaaccagagacaggcgtctgaaattcgcgagggacatcatgcagcgcgagttc ttaccccacatctctcaaaaggagggtcaagacacccgcaaagcctacttcttcggttac atgatccatcgacttttgcagtgtgtgctgggtcgacgcgacgaagatgatcgtgatcac ttcggaaagaagcgcctggatcttgcgggacccttgattgccaacttgttccgtattctg ttcctcaagcttaccaaggatgtgtataagtacctccagcgatgcgttgagaacaaccag gacttcaacgtccagatggctgtcaaggcaagcaccatcacaaacggtctcaagtactcg cttgccactggcaactggggtgaccagaagaaggctgcttcggccaaggctggtgtatcg caagtgttgaaccgatacacctatgcgtctacactttcccatcttcgtcgaacgaatacc cccgtaggtcgtgacggtaaactggccaagccgcgacaacttcacaactcccattggggt ctcgtctgccctgctgaaacccctgaaggacaggcttgtggtttggtcaagaacctgtcg ctgatgtgctacgtcagtgtcggtagcgacgcaacacccattgtcgactttatgactcag cgaaacatgcagcttctagaggagtatgaccagaaccagagtccagacgcgacaaaggtc ttcgtcaacggagtatgggttggtgtccattccaacgctcaacagctcgtcactgtcgtg caagaactgcggcgaaacggtactctctcctacgagatgagtctgattcgtgacattcgt gatcgagagtttaagattttcacagacgctggtcgtgttatgagaccactttttgtcgtt gagaacgacgtccggaagccaaaccgcaaccacctcatcttcacaaaggaaatcagtaac aagctcaagtcggaacaaatggaggccagccagcgacagggctggagcgaggaggaggtc gaacaggctacgtacggttggagagggcttatccaagatggtgtggttgagtacctcgac gccgaagaagaagagactgccatgataacattctcccccgaagacttggaagagtggcga gaaatgaagatgggcctacctatgacggaccactctttggaaggcagccagcgtctccgc cgtctcaagcccttgcccgaccctcgtatccattcgtacacgcattgtgagatccacccg gccatgattctgggtatttgcgccagtattattcctttcccggaccacaaccaatcgcct cgtaacacataccaatctgccatgggtaaacaagccatgggtgtggctcttaccaacttt gcgctgcgcatggagacgatgatgaacgttctctactatcctcagaagcctttggccaca acgcggtcgatggaatacctcaagttccgtgaactgcctgctggacaaaacgctattgtc gcgattgctacttatggtggatacaaccaagaagattccgtcatcatgaaccagagcagt atcgatcgaggtctcttcaggagtctgttctaccgtgcatacacggagcaagagaagcgc attggtgtcaatgtcctagagcagtttgagaagcctacgcgtgccgatacgctgcgtctg aagggtggcacatacgacaagctcgacgacgacggtgtggttgctcctggtgtacgtgtt tcgggtgacgacatcatcattggaaagacggcgccgattgcaactgacgcagcggagctg ggacaaaagactactcttcacaccaagcgcgatgtgtctacgccacttcgtagcacggaa aacggtattgtcgaccaggtactcttcacgaccaacacggaaggtctgcgattcgtcaag gtgcgtaccaggacaaccaaggtgccgcagattggtgacaagtttgcgtctcgtcacggt caaaagggcactatcggcatcacttatcgacaagaagacatgccattctcgagggaggga ctgacgccggatttgatcatcaaccctcacgcgattccgtcgcgtatgacgattgcccat ttggtcgagtgtctgctgtccaaggtgggggccattaccggacaggagggtgacgcgacg ccgtttacagatgtgactgtagaccaagtgtcgcaactgctggagaatgcaggctatcaa aagcgtggtttcgagatcatgtacaacggccacacaggtaagaagatgcgaactcaaatc ttcttgggacccacgtattaccagcgactgaggcatatggtcgacgataagatccacgct cgtgctcgtgggccattacaaattttgacgcgccagcctgtggagggtcgtgctagggat ggtggacttcgattcggagagatggaacgtgattgtatgattgctcacggtgcagctgcc ttcttgaaggagcgcctcttcacggtgtcggatgcgtacacggtgcatgtgtgcgacatt tgtgggctgatgagccctattgcgaatctgaagaagaacctgtacgaatgccggccgtgc cacaacaagacgcgcatctcgcagatccacattccgtacgcggccaaactgctcttccag gagcttctcgccatgaacattgccacacgcatgtttacggaccggtctggactcagcgtg cgcgactag

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