Piliocolobus tephrosceles (Ugandan red Colobus): 111540409
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Entry
111540409 CDS
T07491
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh04360
Axon guidance
pteh04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
111540409 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
111540409 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pteh04040
]
111540409 (TRPC4)
Ion channels [BR:
pteh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111540409 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
111540409
NCBI-ProteinID:
XP_023064455
Ensembl:
ENSPTEG00000025313
UniProt:
A0A8C9HQ74
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All DBs
Position
X:78502889..78698583
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AA seq
982 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLTCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGVRTQHRRAADNLRRHHQYQEVMRNLVK
RYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTIQSANASKESPNSA
DSDEKSDNEGNSKDKKKNFSLFDLTTLIHPRSAAIASERHNISNGSALVVQEPPREKQRK
ANFVTDIKNFGLFHRRSKQNAAEQNANQIFSVSEEVARQQAAGPLERNIQLESRGLASRA
DLSIPGLSEQCVLVNHRERNTDTLGLQVGKRVCPFKSEKVVVEDTVPIIPKEKHAKEEDS
SIDYDLNLPDTVTQEDYVTTRL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctattacaaaagaaatgttaatgctccttatagagatcgcatccctctg
aggatagtaagagcagaatcagaactctcgccatcagaaaaagcctacttgaatgctgtg
gaaaagggagattatgccagtgtcaagaaatccctagaggaagctgaaatttattttaaa
atcaatattaattgcattgatcctctcggaagaactgctctcctcattgcaattgaaaat
gagaacctggagctaatcgaactactcttaagctttaatgtctatgttggagatgctcta
ttacatgctatcagaaaagaagtcgtcggagctgttgagctgttattgaaccacaaaaaa
cctagtggagaaaaacaggtgcctcctatactccttgataagcagttctctgaattcact
ccggacatcacaccaatcattttggcggcccatacaaacaattacgagataataaaactc
ttggttcagaaaggagtctcagtgcctcgaccccacgaggtccgctgtaactgtgtggaa
tgcgtgtccagttcagatgtggacagcctccgtcactcccgctccagactcaacatctac
aaggccttggccagtccctctctcattgcactgtcaagcgaagatccttttctcacagcc
tttcagttaagttgggagcttcaggaactgagcaaggtggaaaatgaattcaagtcggag
tatgaagagctgtcacggcagtgcaaacaatttgctaaggacctactggatcagacaaga
agttccagagaactggaaatcattcttaattaccgagatgacaatagtctcatagaagaa
caaagtggaaatgatcttgcaagactaaaattggccattaagtaccgtcaaaaagagttt
gttgcccagcccaattgtcaacagctgctggcatctcgctggtatgacgagtttccaggc
tggaggagaagacactgggcagtgaagatggtgacatgtttcatcataggacttcttttt
cctgtcttctctgtgtgctacctgatagctcccaaaagcccactcggactgttcatcagg
aagccatttatcaagtttatctgccacacagcctcctatttgacttttttgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtcgagtggatgatattaccatgggtcctgggtttcatatggggagaaattaaacag
atgtgggatggtggacttcaggactacatccatgattggtggaatctaatggactttgta
atgaactccttatatttagcaacaatctccttgaaaattgttgcgtttgtaaagtacagt
gcccttaatccacgagaatcatgggacatgtggcatcccactctggtggcagaggcttta
tttgctattgcaaacatcttcagttctctgcgtctgatctcactgtttactgcaaattct
cacctgggacctctgcaaatatctctgggaagaatgctcctggacattttgaagtttcta
ttcatatactgccttgtgttgctagcatttgcaaatggcctaaatcaattgtacttctat
tatgaagaaacgaaagggttgacctgcaaaggcatacgatgtgaaaagcagaataatgca
ttttcgacgttatttgagacactgcagtccctgttttggtcaatatttggactcatcaat
ttatatgtgaccaatgtcaaagcacagcatgaatttactgagtttgttggtgccaccatg
tttgggacatacaatgtcatctctctggttgttctactcaacatgttaatagctatgatg
aataattcttaccaactgattgctgaccatgcagatatagaatggaaatttgcacgaaca
aagctttggatgagttattttgaagaaggaggtactctgcctactcccttcaatgtcatc
ccaagccccaagtctctctggtacctgatcaaatggatctggacacacttgtgcaagaaa
aagatgagaagaaagccagaaagttttggaacaataggggtaagaacacagcataggcga
gctgctgataatttgagaagacatcaccagtaccaagaagttatgaggaacctggtgaag
cgatacgttgctgcaatgattagagatgctaaaactgaagaaggactgaccgaagagaac
tttaaggaactaaagcaagacatttctagtttccgctttgaagttctgggattactaaga
ggaagcaaactttccacaatacaatctgcaaatgcctccaaggagtccccaaattcggca
gactcagatgaaaagagtgataacgaaggtaatagcaaggacaagaaaaagaatttcagc
ctttttgatttaaccaccctgattcatccgagatcagcagcaattgcctctgaaagacat
aacataagcaatggctctgccctggtggtgcaggagccacccagggagaagcagagaaaa
gcgaattttgtgaccgatatcaaaaactttgggttatttcatagacgatcaaaacaaaat
gctgctgagcaaaatgcaaaccaaatcttctctgtttcagaagaagttgctcgtcaacag
gctgcaggaccacttgagagaaatattcaactggaatctcgaggattagcttcacgggct
gacctgagcattcccggcctcagtgaacagtgtgtgttagtaaaccatagagaaaggaat
acggacacactggggttacaggtaggcaagagagtgtgcccattcaagtcagagaaggtg
gtggtggaggacacggttcctataataccaaaggagaaacatgcaaaagaagaggactct
agtatagactatgatctaaacctcccagacacagtcacccaggaagattatgtgaccaca
agattgtga
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