Parasteatoda tepidariorum (common house spider): 107436857
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Entry
107436857 CDS
T06106
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03040
Spliceosome
ptep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107436857
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107436857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptep03041
]
107436857
04121 Ubiquitin system [BR:
ptep04121
]
107436857
03400 DNA repair and recombination proteins [BR:
ptep03400
]
107436857
Enzymes [BR:
ptep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107436857
Spliceosome [BR:
ptep03041
]
Complex B
Other components
Prp19 complex
107436857
Complex C
Prp19-CDC5 complex
107436857
Ubiquitin system [BR:
ptep04121
]
Ubiquitin ligases (E3)
U-box type E3
107436857
DNA repair and recombination proteins [BR:
ptep03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
107436857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Prp19
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR41
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_VPS8
U-box
Beta-prop_IFT122_1st
eIF2A
ATG16
Rtf2
zf-Nse
Beta-prop_ACSF4
PAS_11
Motif
Other DBs
NCBI-GeneID:
107436857
NCBI-ProteinID:
XP_042904557
LinkDB
All DBs
Position
2:complement(22431244..22452912)
Genome browser
AA seq
460 aa
AA seq
DB search
MSLTCALSNEVPEQPVVSPVSGNIFEKRLIVKYILENGTDPINGKELTEDSLVEIKTPPA
VKPRPPSATSIPAILKTLQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGIAAAPVGAQQPQYGVEAAGIADQPMEEAGMTPEVIQKLQDK
ATLLTTERKKRGKSVPEDLVKPEQIRQFQTLASHPGLHSASVPGILAMDVCPTDTSKILT
GGNDKNAAIFNKDTEQVITILKGHTKKVTSVIFHPEEDTVITASPDSLIRIWHVPTSQTV
LAIKAHEGAVTGLSLHATGDYLLSTSTDEHWAFSDLRTGRVLTKVGDTTASQHSLTTAQF
HPDGLIFGTGTSDSIIKIWDLKERTNVANFPGHSGPISAIAFSENGYYLATSADDSVVKL
WDLRKLKNFKSLTLDESYEVKSLCFDQSGTYLAVAGTDIR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcacatgtgctttaagtaatgaagttcctgaacagcctgttgtgtctcctgtt
tctggtaatatatttgagaagaggcttattgttaaatatattctagagaatggaacagat
cctattaatggaaaagaattgacagaagatagtcttgttgaaattaaaaccccacctgct
gtaaaacctcgaccaccctcagctactagtataccagctattcttaagactcttcaagat
gaatgggatgctgtcatgcttcatagttttacattgcgacaacagctacaaactgctcga
caagaattatctcatgctctgtatcaacatgatgctgcctgtcgtgtaattgcccgtcta
actaaggaagtaacagctgctagagaagctttggcaactcttaaacctcaagctggtatt
gcagctgctccagtgggtgcacaacagccgcaatatggtgtggaagcagctggtattgct
gatcaaccaatggaagaggctggaatgacaccagaagttattcaaaaacttcaagacaaa
gccacactattaactactgaaagaaagaagcgcggtaaatctgttcctgaagatcttgtg
aagccagaacaaattcgccaatttcagactcttgcctctcacccaggccttcacagtgct
agtgttccaggtatcttggctatggatgtttgccccacagacacaagcaagatattgact
ggtggtaatgataagaatgcagctatctttaataaagatactgaacaagtgattaccatt
ttgaagggtcacactaagaaagtgacatcagtcatttttcatccagaagaggacactgtt
atcacagcatcacccgatagccttatcagaatttggcatgttccaacatcacagacagtg
ctggcaattaaagcccatgaaggtgctgttactggtttgagtctacatgctactggtgat
taccttttgagtacttccactgatgaacactgggcattttctgatctgcgtactggcaga
gttttgactaaagttggcgatacaacggcaagtcagcattctttgactactgctcagttt
caccctgatggattgatttttggaactggaacttcagattctattataaaaatttgggat
ttaaaggagagaacaaacgttgcaaacttccctggtcattctggccccatatctgcaata
gcattttctgaaaatggttactatttagccacatcagcagatgattctgttgtcaaactt
tgggatttgcgaaaattgaaaaacttcaaatcattgacattagatgaaagctatgaagtg
aaatcattatgttttgatcaaagtggtacataccttgcagtggctggaacagacattagg
taa
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