Parasteatoda tepidariorum (common house spider): 107440641
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Entry
107440641 CDS
T06106
Name
(RefSeq) collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep04512
ECM-receptor interaction
ptep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107440641
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107440641
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ptep00535
]
107440641
Proteoglycans [BR:
ptep00535
]
Extracellular matrix (ECM) proteoglycans
Others
107440641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
CCHC_ZFPM2
Motif
Other DBs
NCBI-GeneID:
107440641
NCBI-ProteinID:
XP_042903606
LinkDB
All DBs
Position
X2:41134719..41221687
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AA seq
957 aa
AA seq
DB search
MTFKGFFKDYRQNGRSVLQLSRQGRALLSPGIKRFDLIRKFGLDDQATAFQGVKVVRGSN
RMQKAYRLSKRTNLALPTRAIFPQGIPEEFSFISTFRKRSNRKDRWSLISISDSAGRTQF
AVIFDPRKKELEMITLNLEGEIQDARFFDINVDDKEWHKIDLSVRRDRVTLFIDCQPLGI
QPIDIRRPIDVNGDIMVTKFDDSMTVQTELQWMVIHCDPTRSQRETCIELPLRKRNTTVC
EACPPGPKGADGKPGPPGSAGLPGERGPQGWPGISGARGEAGPSGLPGRQGPSGPPGVAG
LQGTPGAAGSKGEVGFPGLPGKPGVKGEKGDIGDTGREGPPGLVGPRGLRGPPGQGAGEA
VPGPPGEPGPPGPQGEQGLQGIPGVYGLAGQKGETGGRGDRGIPGRRGLPGIKGEPGIVG
KPGLPGPPGVQGPPGEQGEPGPKGKPGEKGSRGDAGYEGPPGSKGDKGDRGDAGYSGGDG
QKGAKGDEGRTGESGSQGERGFPGVPGLRGEPGLVGFPGPAGPGGPPGVSGPRGEKGDQG
EPGLPGSVSQAGDPGLAGPPGPPGESGTDGTKGEPGLPGAPGAPGVMGLPGSQGPPGFQG
TEGARGPKGLKGDAGPIGPDGLQGPTGPIGPQGLPGEPGPKGDHGNSGLRGPEGPRGLTG
PTGPSGEVGPPGPPGLPGLTGAAGPAGPPGPPGPPGPMSGIEISDFRAVDNLPELRGPRG
YKGIMGPSGMQGERGQPGDKGPPGTPGNRGMPGPSGAPGASGHPGNRGPPGMPGLPGPPG
RGFSEEEMRDICASVLRDSLEELTSRLQGPPGLPGRGKTGRSGPPGPQGAPGDPGVPGLP
GERGFMGMPGVPGPHGPPGSKGDKGEKGDRGPEGVGVEGPMGLRGVPGPPGPPGTGVPGR
PGDRGPPGRQGTSGVRGAPGPQGPPGYCELCNYQNSDLANFLHPPHSQVDKGNTEND
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttaaaggcttctttaaagattaccgccaaaatggacggtcagttcttcagttg
tctcgccaaggcagagcccttttgtcgccggggatcaagcgttttgatctcattcgcaaa
tttggcttggatgatcaagctacagctttccagggagttaaggttgttcggggctccaat
cggatgcaaaaagcttatcgcttgtcaaagaggactaatcttgcccttccaacaagagct
atttttcctcaaggaattccagaggaattttctttcatatcaacttttagaaaacgcagt
aatcgaaaggatagatggagtttaataagtatatcagattcagcgggaagaactcaattt
gccgtcatttttgatcctagaaaaaaagagctcgaaatgataacacttaatttagaaggt
gaaattcaagatgctcgtttctttgacatcaatgtggatgataaagagtggcataaaatt
gacttgagtgtacgaagagatagagtgacattatttattgattgtcaacctcttggaatt
caaccaattgatatcagaagacccattgacgttaatggagacattatggttaccaagttt
gacgattctatgactgtgcagacagagcttcagtggatggtgatacattgtgatcccaca
agatcccaaagagaaacgtgcatcgaattgccattaaggaaaagaaacactaccgtttgc
gaagcttgcccgccaggtccaaaaggtgccgatggaaaaccgggtcctccgggttctgct
ggtctgccaggagaacgtggtcctcaaggctggcctggtatttctggagcaagaggtgaa
gctggaccttctggactacctggacgacagggcccatctggaccaccaggagttgcaggt
ttacaaggaactccaggagcagcgggcagtaaaggcgaagttggatttcctggtctccct
ggcaaacctggtgttaaaggtgaaaaaggtgacataggagatactggaagagagggtccc
cctggactcgtaggaccacgtggtcttagaggacccccaggacagggagcgggtgaggcg
gttcctggaccacctggcgaacctggtcctcctggaccgcagggagaacaaggcttgcaa
ggaattcctggagtgtatggcttagctgggcaaaagggtgaaactggaggaagaggagac
agagggataccaggacgtagaggtctgcctggaataaaaggtgaacctggaattgtcgga
aaacctggtctaccaggtccaccaggagttcaaggtcctccaggggaacaaggagagcca
ggtcctaaaggaaaaccgggtgaaaagggctctagaggagatgctggatacgaaggacca
cctggatcgaagggtgataaaggagacagaggagacgctggttattctggaggtgatggt
caaaaaggtgcaaagggagatgaaggccgaactggagaaagtggatcgcaaggggagaga
ggatttcctggtgttcctgggttaagaggagaacctggacttgttggatttccaggacca
gcaggacctggaggaccaccgggagtatctggacctcgaggtgaaaagggtgatcaggga
gaacctgggcttcctggatcagtatctcaagctggagaccctggattggcaggacctcca
ggaccacctggtgaaagtggaactgatggaaccaagggtgaacctggattgcctggagca
cccggtgcacctggagtaatgggattgcctggttcacaaggtcctcctgggtttcaagga
actgaaggtgctaggggaccaaaggggttaaaaggtgacgcaggacctataggaccagat
ggattacaaggacctactggaccaattggcccgcaaggattgcctggagaacctggacca
aaaggagatcatggcaactcgggtctaagaggacctgaaggacctcggggactgacagga
ccaacgggaccttctggtgaagtaggacctccaggtccaccaggcttacccggtttaaca
ggagctgcaggacctgcgggaccaccaggaccaccgggacctcctggacctatgagtggg
atcgaaatttctgatttcagagctgttgataatttgccagaattaagggggccaagaggt
tacaaaggtataatgggtccatctggtatgcaaggggaacgtggtcaaccaggagataaa
ggaccccctggaactccgggaaatagagggatgccaggtccatcaggtgcaccgggagct
tctggtcatccaggaaacagaggcccaccaggaatgcctggattacctggaccaccggga
cgaggtttcagcgaggaagagatgagagatatttgtgcttcggtactaagagatagtctt
gaagaattgacttccaggctacaggggcccccagggctacctgggcgtggtaaaactgga
cgctcgggtcctccaggtccacaaggagctccaggtgatccaggtgtgcctggcctacct
ggagaaagaggatttatgggcatgcctggtgttccaggcccgcatggtccaccaggaagc
aaaggcgataagggtgaaaaaggtgatcgaggacctgaaggcgtaggtgtcgaaggacca
atgggtcttagaggtgttccaggtccaccaggaccacctggtacaggagtacctggcaga
cctggagatcgaggtccaccaggtcgtcaaggtactagcggagtaagaggagctccagga
ccacaaggccctccaggatactgtgagctttgtaattatcagaattcagatctcgcaaac
tttctgcacccacctcattctcaagttgataagggtaatacagaaaacgactga
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