KEGG   Parasteatoda tepidariorum (common house spider): 107451307
Entry
107451307         CDS       T06106                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
ptep  Parasteatoda tepidariorum (common house spider)
Pathway
ptep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107451307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptep03041]
    107451307
   03036 Chromosome and associated proteins [BR:ptep03036]
    107451307
Spliceosome [BR:ptep03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107451307
 Complex B
    107451307
 Complex C
   U2 SnRNP specific factors
    107451307
Chromosome and associated proteins [BR:ptep03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    107451307
SSDB
Motif
Pfam: Astacin SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_MROH2B_C HEAT_EF3_N TPR_DNAAF5 HEAT_ECM29 HEAT_GCN1 Htt_N-HEAT_1 TPR_IPO5 HEAT_2 XMAP215_CLASP_TOG VPS15-like_hel TPR_IMB1
Other DBs
NCBI-GeneID: 107451307
NCBI-ProteinID: XP_015922847
LinkDB
Position
5:23855914..23892765
AA seq 1537 aa
MADVQRPPDGGDVPLTASAGIYMDEDIYGGTKSKYEGYVTSIAANDEADVDDEDYDATSL
MNSKKSGFTAPVAFLQELRGDRDYDPFGEHKKGQRVADKEDEYRAQRRKFMISPERSDPF
ADGGKTPDAQSRTYQVIMREQALNKDQVELRKKISEKSKSGELKSVQNGDVSAKPAKRRR
WDQTVGEETPSSTPSSKKKATSWDAAESHTPSNSRWDETPGRIPKGSETPGATPGQSTRL
WDATPAHATPGAATPGHDTPGHRGTPSARRNRWDETPKTDRETPAHGSGWAETPRTDRTG
TDLIQETPTPSASKRRSRWDETPSSQLGNQTPQTPSMMTPMTPMTPMTPITPSGITPTGS
KAMGMATPTPGHIMAMTPEQLQAYRWEREIDERNRPLTDDELETMFPPGYKVLQPPAGYV
PIRTPARKLTSTPTPLGGQSGFFFQKEDPVKMMDTQPKGNLPPLKPEDIQYFDKLLADVD
EESLSPDEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPT
LEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKA
AGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPALLPFLKAVCRSKKSWQARHT
GIKIVQQIAILMGCAILPHLRNLVEIIEHGLVDEQQKVRTITALALAALAEAATPYGIES
FDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEE
MKKIVLKVVKQCCATDGVEPQYIKEDVLPHFFKHFWNHRMALDRRNYRQLVDTTVEIANK
VGAAEIIHRIVDDLKDENEQYRKMVMETIEKIMANLGAADIDSRLEEQLIDGILYAFQEQ
TTEDMVMLNGFGTIVNALGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMK
TCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPI
LKNRHEKVQENCIDLVGRIADRGAEYVSAKEWMRICFELLELLKAHKKAIRRATVNTFGY
IAKAIGPHDVLATLLNNLRVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNV
QNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACAAIQHMALGVYGFG
CEDALVHLLNYVWPNIFETSPHLVQAFMGAVEGLRVALGPIKILQYCLQGLFHPARKVRD
VYWKIYNTLYIGGQDSLVAGYPRIPGVFIFPLAPKVKTMKFVLACLVLVAAATALPTNDL
RQSALYNPDLFEGDILGFEPGDRNVIPYTQMRWQNNEIPYVIDRTLATQQALILSAMNDY
HINTCLRFKPRTTERNYIKLFSGQGCYSYVGMINRGEQPLSLGPGCLYKGTIVHELGHAI
GFFHEQNRSDRDQYLTIYWQNIQSGMETQFALLKPHENLLLTTFDHDSIMLYGNYAFSRD
RTSLTMVAKNGRRLLEPYDKQGLTISDITRVKKMYNC
NT seq 4614 nt   +upstreamnt  +downstreamnt
atggccgatgttcaaagacctccagatggtggggatgtaccccttaccgcctcagcaggc
atttatatggatgaagatatttatggtggaaccaagtctaaatatgaaggatacgttacc
tccatagcggcaaacgatgaagctgatgttgatgatgaggattatgatgccacaagttta
atgaacagtaagaagagtggttttactgcaccagttgcatttttacaggaattaagagga
gacagagattatgatccctttggtgaacacaaaaaaggtcagcgtgttgctgataaagaa
gatgaataccgtgctcagaggaggaaatttatgatctcacctgaaagatcagatcctttt
gctgacggtgggaagactcctgatgcgcaatctagaacctaccaagttattatgagagag
caagctctcaacaaagatcaggtggaattaagaaagaaaatttcagaaaaatcaaagtct
ggagagcttaagtctgttcaaaatggtgatgtttctgcaaaaccagcaaaacgtagaaga
tgggatcaaactgttggtgaggaaacaccatcctcaactccttcatccaagaaaaaagct
acgagttgggatgctgcagaatcacatacaccgtctaacagccgatgggatgaaactccg
ggaagaattcccaaagggtcagaaacacctggagctacaccaggacaaagtactaggcta
tgggatgccacccctgcacacgccactcctggtgctgccactccaggccacgacactcct
ggtcatagaggtacacccagtgctcgtcgaaacagatgggatgagacaccaaagacagac
agagaaacccctgctcatggaagtggttgggcagaaactcctcgcactgacagaacagga
actgacctcattcaagaaactcccacacccagtgccagcaaacgtaggtcacgttgggat
gaaactccttcttcacagttgggcaatcaaactccacagacaccctccatgatgactcct
atgacacccatgacccctatgactcccattacaccaagtggtatcacacctactggtagt
aaagctatgggcatggcaacacctacaccaggacatataatggcaatgacacctgaacag
ttacaagcttacaggtgggagagagaaatagatgaacgaaacagacctttaaccgatgat
gagctggaaacaatgtttcctcctgggtacaaagttcttcaaccaccagctggctatgta
cccattcgcacacccgcacgtaaactgacctctacgcccacaccccttgggggtcagtct
ggattctttttccagaaagaagatccagtgaaaatgatggacacacaaccaaaaggaaat
ttgcctcctctgaaaccagaagatatacagtactttgataaacttttggctgatgtagat
gaagaatctctgagccctgatgaacaaaaagagcgcaaaattatgaaactactcttgaag
attaagaatggcactccacccatgaggaaagcagccctccgacagattacggacaaggcc
agagaatttggtgcaggccctctattcaatcaaatacttccacttcttatgtcaccgacc
ttggaggatcaagagcgccatcttctggtgaaagtcatagacagaattctgtacaaattg
gatgatttagtgagaccctatgtacacaagatacttgtagttattgagcctctgttgatt
gatgaagattattatgctcgtgttgaaggaagagaaattatttctaatttagccaaggct
gctggattagctacaatgatttccacaatgaggccagatatagacaacatagatgagtat
gttagaaacacaactgccagagcttttgctgtagtagcttctgctctaggtatacctgca
cttttacccttcttgaaagctgtatgtcgcagtaagaagtcatggcaagccaggcatact
ggtattaaaattgtacaacagatagccattctaatgggttgcgctattctaccacatctg
agaaatcttgtagaaattattgaacatggtttggttgatgaacaacaaaaagtacgaact
attactgcgttggcgctggccgctttggctgaagcagctaccccatatggtattgagtcc
tttgatagtgtgttgaaacctttatggaaaggtatccgaactcatcgtggtaaaggttta
gctgcttttttgaaagctattggttacctgatacctcttatggatgcagaatatgctaat
tactataccagagaagtgatgttgattcttattcgagaatttcaatctcctgatgaagaa
atgaaaaaaattgtgttaaaagtagtaaaacagtgttgtgcaactgatggtgtagagcca
caatacattaaagaagacgtgttacctcatttctttaaacacttttggaaccatcgaatg
gctctggataggagaaattatcgacagttggtcgatacaactgttgagatagcaaataaa
gtgggcgcagctgaaataatccacagaatagttgacgatttgaaggatgagaatgagcaa
tatcgtaagatggtgatggagaccattgaaaagatcatggctaacttgggtgctgcagat
atagattcaaggttagaagaacagctcattgatggcattctgtatgcattccaagaacaa
acaactgaggatatggtaatgttgaatggctttggcactattgtgaatgcccttggcaag
cgggtgaaaccctatctccctcaaatttgtggtaccattctatggaggttgaataacaag
tctgccaaagtgcgacagcaggctgctgatctcatttcaaggatagcagttgtgatgaaa
acatgccaagaagaaaaactaatgggacatttaggtgttgtgttatatgaatatttgggt
gaagaatatccagaagtattgggttctattcttggagctctgaaagcaattgtcaatgta
attggaatgcacaagatgactcctcctatcaaagatcttttaccaagattgacccctatc
cttaagaacagacatgaaaaagtacaagagaattgcattgatttagtgggtaggatagca
gatagaggagctgagtatgtctcagctaaagaatggatgagaatatgttttgagctgctg
gaactactaaaagcacacaagaaagctatcagacgagctacagtcaacacatttggttat
attgccaaggctattggtcctcatgatgtacttgcaactctattgaacaacttaagagtg
caagagcgtcaaaacagggtgtgtaccacagttgccattgctattgtcgcagaaacatgc
tctccattcaccgtcctccctgccttgatgaatgaatatagagtgcctgaattgaatgtt
cagaatggtgttctcaaatccctttccttcttatttgaatacattggagaaatggggaag
gattacatttatgctgttacccctctccttgaagatgcactaatggacagagacttggtc
catagacagactgcatgtgctgcaattcaacatatggcattaggtgtgtatggatttggt
tgtgaagatgcccttgttcaccttttaaattatgtttggccaaacatctttgaaacctca
cctcatttagtacaagcttttatgggtgctgttgaaggcctccgagttgcattgggtcca
attaaaatactgcagtactgtttacagggtcttttccatccagcaagaaaagttagagat
gtgtactggaaaatttacaacacgttatacattggtggccaggactctttggtggctgga
tatcccagaattccgggcgtcttcatttttccgttggcaccaaaagtgaaaacaatgaag
tttgtacttgcctgccttgtgcttgttgcagctgcaactgcactacccacaaatgacctc
agacaatcggctctttacaatcctgatctctttgagggagatattctcggattcgaacct
ggtgacagaaatgttattccatacactcaaatgagatggcaaaacaacgaaatcccatac
gttattgacagaactctcgccacccaacaggctttgatcttgtctgcaatgaatgattat
catatcaacacttgcttgagattcaaaccaagaactactgaaaggaactacatcaagctc
ttctctggacaaggatgttactcatacgttggtatgattaaccgtggtgagcagccatta
tctcttggacccggttgcttgtacaagggaaccattgtccacgaattgggacacgccatc
ggattcttccacgaacagaacagatcggacagagatcagtacttgaccatctattggcag
aacattcaatcaggtatggagactcagttcgccttgttgaaaccccacgagaacttgttg
ctgaccaccttcgaccacgactccattatgttgtacggtaactacgctttctcaagggac
aggacatccctcaccatggtggccaagaatggaagacgtctgcttgagccctacgacaag
caaggactcaccataagtgacatcactagggtcaagaaaatgtacaactgctaa

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