Puntigrus tetrazona (Sumatra barb): 122322939
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Entry
122322939 CDS
T08985
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122322939 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122322939 (nup93)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122322939 (nup93)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
122322939
NCBI-ProteinID:
XP_043072483
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Position
18:25349481..25371467
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AA seq
820 aa
AA seq
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MDTEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDTADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRDSMLVQWEQVKQRVLHTLLGAGEDALDFSQEVEPSFVSEVGIPGRSALDS
VEVAYSRQIYIFNEKIVNGHLQPNLGDLCASVAESLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKCRVSVDMQMAFVRQALQFLENSYKNYTMVTVFGNLHQAQLGGVPGTYQLVCSFLNI
KLPTPLPGMQDGEVEGHPVWALIYFCLRCGDLSAAMQVVNRAQHQLGDFKIWFQEYMNSP
DRRLSPVTENKLRLHYRRVLRNSADPYKRAVYCLIGKCDIGDNHGEVADKTEDYLWLKLN
QVCFDEDGSSSPQDRMTLAQLQKQLLEDYGESHFSASHQPFLYFQVLFLTAQFEAAIAFL
FRVERLRSHAVHVALVLYELKLLLKSSGQSAQLLSQEAGDPPMVRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIITKVASEAENKGLFEEAVKLYELAKNADKVLELMNKLLSPVIAQVSEPQSN
KERLKNMAVAIAERYRTNGIAGEKSVDSTFYLLLDLMTFFDEYHAGHIDRAYDVIERLKL
VPLSQDSVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQYKRLKGAAAGTPGRPQRTLE
DRDMLLRSQARALITFAGMIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatactgagggcttcggggaactcctgcagcaggcagaacagcttgcggcagagact
gaggccgtgtccgagctgccccatgttgagcgaaacctacaggagatccagcaggcagga
gagcgtctacgttcccgtactctcaccagaacctctcaagacacagctgacgtaaaagcc
tccatcctcttgggttctcggggtcttgacatcttccatatctcccagcgtcttgagagt
ctcagtgctgccactacatttgagcctcttgagccagtcaaggacactgatattcagggc
tttctgaagaacgagagagacaatgcactgctgtcagccatcgaggaatcacgccgcagg
acatttctgctggcggaggagtaccacagagactctatgttggtgcagtgggagcaggtg
aagcagagagtgttgcacaccctgctgggagctggagaggatgcactggacttcagccag
gaagtggagcccagttttgtgagtgaggtcggaataccaggacgcagtgcactggacagt
gtagaagttgcctacagccggcagatctatatcttcaatgagaagatagtaaatggacat
cttcaacccaacctgggagatctctgtgcctcagtagccgaaagcctggatgataagaac
gtgtcagacatgtggctcatggtgaagcagatgacagacgttctgttggtgccagcaaag
gacacgctgaagtgcagagtgtctgtggacatgcagatggccttcgtcagacaagccctg
cagtttctggagaacagctataaaaattacacgatggtcactgtatttgggaatctgcac
caggctcagctgggtggagtacctggcacttatcagcttgtatgcagcttcctaaacatc
aagctgccgactccactgccaggcatgcaggacggcgaggtggagggacatccagtgtgg
gctctgatctatttctgcctgcgttgcggagacttgtctgccgccatgcaggtggtgaac
agggcacagcatcagctgggcgactttaagatttggtttcaggaatacatgaacagcccc
gaccgacgtttgtctcctgtcacagagaataaactacgacttcattaccgacgcgtgctg
aggaatagcgctgacccctacaagcgtgcagtttactgcctcatcggcaaatgcgacatc
ggcgacaatcatggagaggtggccgataaaacagaagactacctgtggctcaagctgaat
caagtatgttttgatgaggatggcagcagttcccctcaggacagaatgactctagcccaa
cttcagaaacagctactggaggactatggtgagtcccatttctcagccagccaccagcca
ttcctgtacttccaggtgcttttcctgactgcacagtttgaggcggccatagcgttcctt
ttccgagtggagcgtctgcgcagccatgctgttcacgtagctctggtgctgtatgaactc
aaactgctgctcaaatcatcgggccagagcgctcagctattgagtcaagaggctggagat
ccaccaatggtgcgacggctcaacttcattaggctgcttatgctctacacccgcaagttt
gagtccacagacccacgagaagctctgcagtacttctactttctccggaatgagaaggac
agtcaaggagaaaacatgttcatgcgctgtgtcagcgagctagtcatcgagagtcgggag
tttgatatgcttcttggaagacttgaaaaagatggaagcagaaagcccggcgtgatcgac
aagtttgccggagacacgcgggccatcattaccaaggtggcctcggaggcagagaacaag
ggcttgtttgaggaggccgtcaaactgtacgagttagccaagaatgctgataaggttctg
gagctgatgaacaaattgttgagtcctgttatcgctcaagtcagcgagccccagtctaac
aaagagcgactcaaaaacatggcggtggctattgctgaacggtaccgtactaatggtata
gctggggagaagtctgtggacagcaccttctacttgctcctggacctcatgacgtttttt
gatgagtaccacgccggacacatagaccgagcctacgatgtgattgagaggctaaagctg
gttcctttaagtcaggacagtgtggaggagcgggttgcagcattcagaaacttcagtgac
gagataaggcacaatttatcagaggttctgctggccacaatgaatatcctgtttacacag
tacaagcgtctaaagggggctgcagcaggtacgccaggaagacctcagcgtaccctagag
gacagagacatgctgctgcgcagtcaagcccgggctctgatcacgtttgcgggaatgatt
ccgtatcgcatggctggagataccaatgccagactggttcagatggaggtcctaatgaac
tga
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