Puntigrus tetrazona (Sumatra barb): 122324957
Help
Entry
122324957 CDS
T08985
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122324957 (crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122324957 (crnkl1)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122324957 (crnkl1)
Spliceosome [BR:
ptet03041
]
Complex B
Other components
Prp19-related factors
122324957 (crnkl1)
Complex C
122324957 (crnkl1)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
122324957 (crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
TPR_17
TPR_12
Mad3_BUB1_I
U3_assoc_6
Transketolase_C_1
Motif
Other DBs
NCBI-GeneID:
122324957
NCBI-ProteinID:
XP_043075688
LinkDB
All DBs
Position
20:complement(20968188..20975755)
Genome browser
AA seq
757 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDSEELND
YKLKKRKGFEDNIRKNRTVISNWIKYAQWEESLKEVQRARSIYERALDVDHRNITLWLKY
AEMEMKNRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNIAGCRQVFERWMEWEPE
EQAWHSYINFELRYKEVDKSRSIYENFVMVHPEVKNWIKYAHFEEKHGYIARARKVFERA
VEFFGEEQISESLYVAFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFKNYTVFEKRF
GDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADADTVREVYERAIANIP
PIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLELIPHKKFTFAKIWLLYGQF
EIRQKNLQNARRGMGTAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFSPENCTT
WIKFAELETILGDTDRARAIFELAIGQPRLDMPEVLWKSYIDSEIEQEEYDNTRGLYKRL
LQRTQHVKVWISYAQFELSIDSDDRIQRSRQIYEEANKSMQSCEEKEERLMLLESWRDFE
DEFGSFTNKERVRKLLPEKVKKRRKITAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKKQQQEDEKDQEDEDEKEEEEEEEEGGQQVPQGKEAQESPEREEQGPAASTEQPENE
CDDRDDESSSSESESDGGDREEDKDETKETKADTENQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccgcggcgggtaaacagagaataccgaaagtggcgaaggtgaaaaataaa
gccccggcggaggtgcagatcaccgcggagcagctgcttagagaggcgaaggagagggaa
ctagagctgctgcctcctccacccaaacagaagatcactgattcagaagaactcaacgac
tataaactgaagaagaggaaggggtttgaagacaacatcaggaagaacagaactgtcatc
agcaactggatcaaatacgcacaatgggaggagagcctgaaggaggtccagagagctcgc
tctatatacgagcgggcactcgacgtggatcaccgcaacatcacactgtggctgaagtat
gcagagatggagatgaagaaccgacaggtgaaccacgctcgcaacatctgggaccgagca
atcaccatcttgccccgtgtcaatcagttctggtacaagtacacctatatggaggagatg
ctgggaaacatcgctggctgcaggcaggtgtttgagcgctggatggaatgggagccggag
gaacaggcctggcattcgtatatcaactttgagctgcggtataaggaagtggacaagtcc
cgcagcatctatgagaactttgtgatggtccatcccgaagtgaagaactggatcaagtac
gctcatttcgaagagaagcatggttacatcgctcgagcgaggaaggtgtttgagagagct
gtggagttttttggcgaggagcagatcagtgagagcctctacgtggcttttgccagattc
gaggagaagcagaaagagtttgagagagttcgtgtcatctataaatacgctttggacaga
atccccaagcagcaggcccaggagctgtttaagaactacactgtgtttgagaagcgcttt
ggagacaggagaggaatcgaggacgtgatcgtcagcaaaaggaggtttcagtatgaagag
gaagttaaggctaacccacacaattatgatgcctggtttgattacctgcggctggtggag
agtgacgccgatgcagacacggttagagaagtgtacgagagagccattgccaacataccc
cccatccaagagaagagacactggagacgctacatctacctgtggattaactatgctctc
tatgaggagctggaggtcaaggaccctgagagaacgaggcaggtgtatcaagcgtgtctg
gagcttataccacacaaaaagtttacattcgccaagatttggcttttatacggacaattt
gaaatcagacagaaaaaccttcagaatgctagacgaggcatgggtacagccatcggaaag
tgtcccaaaaacaaactgttcaaaggctacattgagctggagctacagctgagagagttt
gatcgctgcaggaagctttatgagaagtatctggagttcagtccagaaaactgcaccacc
tggatcaagtttgcagagctggagaccatcctgggagacacagaccgggccagggccata
tttgaactggccattggacaaccgcgacttgacatgccagaggtgctgtggaagtcctac
atcgactctgagatcgagcaagaagaatatgacaacacacgagggctttataaaagactg
ttacagcgtactcaacatgtcaaagtctggatcagctatgctcagtttgagctgtccatc
gacagtgacgaccgcattcagcggagcagacagatctacgaggaggccaacaagagtatg
cagagctgtgaggagaaggaggaacgtctgatgctcctggagtcttggagagactttgag
gatgaattcggatcgttcaccaataaggagagagtgcgcaaactcctgccagagaaggtg
aagaagaggaggaagatcacagcagaggacgggtcggatgcaggttgggaagaatattac
gactacatcttccctgaagatgctgccaaccagcccaacctcaaactgctggccatggcc
aagatgtggaagaagcagcagcaggaggatgagaaagaccaggaggatgaggatgagaag
gaggaggaggaggaggaggaggaaggaggacagcaggttcctcaagggaaagaagcacag
gagagcccagaaagagaggagcagggacctgcagccagcacagaacagcctgaaaacgag
tgtgatgatcgcgacgatgagagcagcagcagtgaaagcgagagtgacggtggcgaccgt
gaagaggacaaagacgagacgaaagaaacaaaagcggacacagaaaatcagtga
DBGET
integrated database retrieval system
