Puntigrus tetrazona (Sumatra barb): 122327281
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Entry
122327281 CDS
T08985
Symbol
capn1b
Name
(RefSeq) calpain-1 catalytic subunit b isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04141
Protein processing in endoplasmic reticulum
ptet04210
Apoptosis
ptet04217
Necroptosis
ptet04218
Cellular senescence
ptet04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122327281 (capn1b)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
122327281 (capn1b)
04217 Necroptosis
122327281 (capn1b)
04218 Cellular senescence
122327281 (capn1b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122327281 (capn1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptet01002
]
122327281 (capn1b)
Enzymes [BR:
ptet01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
122327281 (capn1b)
Peptidases and inhibitors [BR:
ptet01002
]
Cysteine peptidases
Family C2: calpain family
122327281 (capn1b)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
CAPN13-like_C_EFh
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
122327281
NCBI-ProteinID:
XP_043078441
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All DBs
Position
22:complement(12659174..12670694)
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AA seq
738 aa
AA seq
DB search
MYSIGGVSSRIYKERLQAEGMGSNDNAVKFLNQDYEELKRECLEGGRLFEDPCFPAVPQS
LGFKELAPNSSKTRGVQWLRPSELSNNPEFIVGGATRTDICQGALGDCWLLAAIASLTLN
DRLLHRVVPHGQSFTDEYAGIFHFQFWQFGEWVDIVIDDRLPVKDKELMFVHSAEGNEFW
SALLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVAEMYELCNAPKDLPRIIAKALERGSL
LGCSIDVSPHSAYYRPGDTEQHLWIHILTFLCNLSVFVWQITSAFDMEAVTFKKLVKGHA
YSVTGLREVNFRGSRERLIRIRNPWGQVEWTGAWSDNSSEWNGIDPAEREEMNNHMEDGE
FWMSFQEFKRQFSRLEICNLTPDALSEDSLNFWNTIKFNGTWRRGSTAGGCRNHPNTFWI
NPQYKITLLEEDDDPEDDEVACSFLVALMQKDRRRYRKQGQDMHTIGFALYKVPEEFSGS
QSIHLKKDFFLRQSSCARSKTFINLREVSTRLKLPPGEYLIVPSTFEPGKEADFVLRVFT
EKQSETQEMDDEISFNLEDEEEVSEDDMEDSFKKLFAQLSGEDMEISVHELRTILNRVVG
KHRDLKTDGFSLESCRCMVSLLDKDGSARLGIVEFQILWNKIRKWLGIFRKFDLDKSGTM
SSYEMRLAVESAGFKLNNKLHQIIVARYSDGETIDFDNFVCCLVKLEAMFRTFRELDKEG
SGVAELNVSEWLYLTMCG
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtattccatcggaggagtgtcgtcgcgtatttacaaggaacgcctgcaggcagaaggg
atgggaagcaatgacaatgcggtcaagttcctgaaccaggactacgaggagctgaagaga
gagtgtctggagggcggcaggctgtttgaggacccctgcttccccgccgtgccacagtca
ctgggcttcaaggagctcgcgccaaactcctccaaaacacgcggcgtgcagtggttaaga
ccctctgagctgtcaaataaccctgagttcatagtgggcggagccacacgtacagatatt
tgccagggggccctaggggactgttggctgttagctgccatcgcgtccctgactttaaac
gacaggctgcttcacagagttgtacctcatggacaaagctttacggatgagtatgccggc
atcttccacttccagttctggcagtttggcgagtgggtggacattgtgatcgatgaccgt
ttgccagtgaaggataaagagctgatgtttgttcactcggcagagggaaatgagttttgg
agcgccctgctggaaaaagcctatgccaagctaaatggctcatatgaagctctttcggga
ggatccaccaccgaaggcttcgaggacttcacgggtggagtagcggagatgtatgagctg
tgtaatgctcccaaagatttgccccgcatcattgccaaagccttggagagaggctcactg
ttgggctgctctattgatgtgagtccccacagcgcctactacaggcctggagacacagag
cagcatttatggatccacatactcacttttttatgtaatttgagtgtatttgtctggcag
atcaccagtgcctttgatatggaggctgtaacctttaagaagctggtgaaggggcatgca
tactccgtcacgggtctcagagaggtgaatttccgtggcagcagagagaggctcatccgc
atccgaaacccttgggggcaagttgagtggacgggggcttggagtgacaattcttctgag
tggaatgggattgatccagcagaaagagaggagatgaacaaccacatggaagatggcgag
ttctggatgtcatttcaagagttcaaacgtcagttttctcgcctggagatctgtaacctc
acgccggacgctctgagtgaagactctcttaatttctggaacacgattaaatttaacggc
acctggaggagaggaagcacagcggggggctgcaggaaccaccccaatacattctggata
aaccctcaatataagatcacgctgctggaggaagatgatgatcctgaagatgatgaggtg
gcctgcagcttcctggtggccttgatgcagaaggacaggcgacgttaccgcaagcaaggg
caggacatgcacaccatcggcttcgccttatataaggtcccagaagagttcagtggttcc
cagagcattcacctcaagaaggactttttcttgcgtcagtcatcctgcgcacgctcaaaa
accttcattaacctgcgggaagtcagcacccgactgaagctgccgccgggcgagtatctc
atagtcccatccacttttgagcccggaaaagaggccgatttcgtcctgcgagtcttcact
gagaaacagtcagaaactcaagaaatggatgatgagatttcatttaacctggaagatgaa
gaagaggtttcagaagatgacatggaagactctttcaaaaaactgtttgcgcagctgtcc
ggagaggacatggagatttcagttcacgagctcaggaccattctgaaccgagtggttggc
aaacacagggacttgaagacagacgggttcagtttggagtcgtgcaggtgcatggtcagc
ctgctggataaagatggcagcgctcgcctgggaattgtggagttccagattctgtggaat
aaaatcaggaagtggctgggcatttttagaaagtttgatctggataaatctggcacgatg
agctcgtatgaaatgcgcctcgccgtcgagtcggccggttttaaactcaataacaagcta
catcaaataatcgtggcgcgatattctgatggagaaacgatcgactttgacaatttcgtc
tgttgcctggtcaagctggaggccatgttcaggacttttagagagctggacaaagagggt
tcaggcgtcgcagagctcaatgttagtgagtggctgtacctgaccatgtgtggttga
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