Puntigrus tetrazona (Sumatra barb): 122327298
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Entry
122327298 CDS
T08985
Symbol
arhgef18b
Name
(RefSeq) rho guanine nucleotide exchange factor 18 isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122327298 (arhgef18b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122327298 (arhgef18b)
Membrane trafficking [BR:
ptet04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
122327298 (arhgef18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
SOS1_NGEF_PH
C1_2
Motif
Other DBs
NCBI-GeneID:
122327298
NCBI-ProteinID:
XP_043078478
LinkDB
All DBs
Position
22:complement(5882826..5922490)
Genome browser
AA seq
1580 aa
AA seq
DB search
MLNNPRWFPPLIRLWDTSFLISRSLTPLGEPHTVHMADPPLHNSWPSFSWMKRWSFKRAS
DCKPCSQLRAPVSAPSSSSSLSPTSIPEDVFFSSSPEDKRNFLTESNECSSEEDLLDLCS
SLRDSEYFRDLQLGSAEPPDTQLPVLSISAPSVPPASTSEIGSRQTSTEFNTHQLFQTDD
TVISTGGEAMDRLVAIRNSEPKDFQDYPESDQDEDSDTDNFPILVRSMSTSRRHSWEVPV
SPIDLGRRFSLDTNGIDSDGEREVNCLAKSPILPSSSFSESSVEETTSAVESESSQTPKP
TTPAKTIYSRSEILATDEKSQADRVSRIVETSKQAAREAGEEQESEEELQSVEGRSHVLM
VQKVLQELKQYHGAKRRTSSAERKEVAGNFTWYEFLTTENDEEEEERPERPEKGTKVKRT
LSSLRNRVTGSFNKDKGKTRDKEQQKEKSREREKDKEKEKELREREKVRRRSVSGHQLVP
GSFSTWATCSLCSKTLQRKHGLQCLNCAVNVHKSCKNLLPECSSKNKIKDSAQKTSNAAA
QAHSQALREPCSALTPVDGSSRTSRCASGMTVPPKGHNAQPASSSNPTVSHNNSSGSITG
EMDEVDAFRMKRPTDDAVSLASTTPESLLVEDAYYATVRGELETIAQDFEVESWSLAVDQ
HFLKKHSKEMIKRQDVIYELIQTEMHHVRTLKIMLRVYARDLREALQLDDRKLACLFPRL
DSLLELHSHFLSRLRERRAEFVQPGSDRNYAIHKLSDILISQFSGELGEQMKESYGDFCS
RHTEAVNYYKEQLQSNKKFQNLMRKISNLPIVRRLGVPECILLVTQRITKYPVLLERILH
NTEAETEEHEGLAKALGLIKDVIVQVDTQVSLYEKEVRLREIASKVEPKSLGKIKDGRVF
RKEDLSHGRRKLLYESMVNWKAASGRLKDILALLLTDVLVLLQEKDQRYVFSTVDNKPSV
ISLQKLIVREVAHEERAMFLICASSNEPEMYEIHTASKEDRNTWITHIRQAGESCPHIEE
RLFSEEEEARVARFREFQDRLTLKDAQIAQGLTEKLQLFAELAESVAGLEDAGSRSRLLL
RGDASDLQQGEQLLKGAITEVENLQNLLSSGAREAAPQTEGNQSPSLSLLPRRADTFGGY
DSIPSILPKNGSIKKKVAGAAGRTRDRSQRASSDPQLKEVYSCQDQDELDEASSPGSHKT
WSACKFPESEFYERVLLLSQRLYSLQAIISQQDSHIELQRASLLTAERDRPGSRSRGTDV
LLEQEKQRNLEKHREELANFQRLQSQHRQEQARWEREREKQRRQAEAAEQRLKEREEECR
RLELRLVEEKQELERQRQTYQQDLERLRESTRTVEKEKERLDQQRKLKKHHTVPNTAALY
AQEVGQLSSSSSFNGELLLGGAGDQTFPQKSHLRASLSVSPADYSERPEVHSRRESSCGA
LTAKTEVPIHLISTTNQLHKQGSVQQQIPTKLAALSKGKEKSGKGKSSHRADSLASADIK
QMLPIKLSSRDSDGGHKARRPISPHQPQHSHSDSLSPPDAQADAPSSLAPAVLKTHNQAS
QPTLSYTVSDEAAKEDVIYF
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgttaaataatccccggtggttccctcctctgatccggctctgggacactagttttctg
atatctcgttcactaactcctctgggagaacctcacaccgtccacatggcagatccacct
ctgcacaactcctggccctcgttctcatggatgaaacgatggtccttcaaaagagcctca
gattgcaaaccatgctctcaacttcgagccccggtctcagctcccagctcctcctcatct
ttgtccccgacctccatcccagaagacgtcttctttagcagttcacccgaggacaagaga
aatttcttgactgagagcaacgagtgcagcagtgaagaggaccttttagacctttgctct
tctctgagagattcagaatatttcagagacctgcaactcggatccgctgaaccaccagac
acacaacttcctgttttatccatttctgccccttcagtacctcccgcatccacatcggaa
attggatctaggcagacttccacagaattcaacacccatcaacttttccagacagacgac
actgtaatttctacaggaggggaagccatggatcgcttggttgccatcagaaactcagaa
ccgaaagacttccaggattatccggaatccgatcaagatgaggactcggacacggacaac
tttcctatattggttagatccatgtccacttcacgtagacacagttgggaagtgccagtg
tcaccgattgacctgggaagaaggttcagtctagacactaatggcattgacagcgatggg
gaaagagaggtcaactgtttggcaaaaagtcccattctaccatcttcctccttctccgaa
agctctgtagaagaaaccaccagcgcagtggaaagtgaaagttcccaaacaccaaagcca
accacaccagccaagacgatatattccagatctgagatccttgcgactgatgaaaaatct
caagctgacagagtctcccgcatagtggagacttctaagcaggctgccagagaggctgga
gaagagcaggagtcggaagaggagctgcagtcagtggaaggacggagtcatgtgctgatg
gtacagaaagttctgcaggagcttaagcagtatcatggagctaaacgcagaacttcaagt
gcagaacgaaaggaggtggcagggaatttcacatggtacgagtttctcaccaccgaaaat
gacgaggaagaggaggaaagaccggagcgtcctgaaaaaggcactaaagtcaagaggact
ctgagctcactgaggaaccgcgtgaccggatccttcaacaaagacaaaggtaagacccgg
gacaaagagcagcagaaagagaaaagcagagagcgagagaaggacaaagagaaagagaaa
gagttgcgcgagcgtgagaaagtgcggcggcgcagcgtgagcggccaccagctcgtgcct
ggctcgttctccacctgggccacatgttcactgtgcagcaagaccctgcagagaaagcat
ggcctgcagtgtctgaactgcgccgtcaacgtccacaagagctgcaagaacctgctgccc
gagtgcagcagcaaaaacaagattaaagactcggctcagaagacttcaaacgccgcagct
caggcgcacagtcaagctctgagggagccctgctctgccctgacccccgtcgatggctcg
tcccggacgtctcgctgtgcttcaggtatgaccgtcccacccaaaggacacaacgcccaa
cctgcctcctccagcaaccctaccgtcagccacaacaacagcagcggctctatcacagga
gagatggacgaggttgacgcgttcaggatgaagcggcccaccgacgacgccgtatctctc
gcctccaccacgcctgagtctctcctcgtcgaagacgcgtattacgccacagtacgaggg
gagctggaaaccatcgcacaagatttcgaggtggagtcctggagtctggctgtggaccag
cacttcttgaagaaacattcgaaggaaatgatcaagagacaggacgttatatacgagctc
atccagacggagatgcaccacgtgcggacgctcaagatcatgcttcgggtttacgctcga
gacctgcgggaggcgctacagctggacgacaggaagctggcctgtctgtttccccggcta
gacagcctgctggagctgcacagccacttcctgtcccgcctccgagaacgtcgcgcagaa
ttcgtgcagccaggcagcgatcgcaactatgccatccataaactctcagatattcttata
tcccagttttccggagagcttggagagcaaatgaaggaaagctacggggatttctgcagt
cggcacactgaagcggtcaactactacaaagagcagctgcagagcaacaagaagttccag
aacctcatgagaaaaatcagcaatctgccaatagtgcggcggttaggcgttccagagtgt
atcttgctggtgacgcagcgaatcaccaagtatcccgttcttctggagcgcatcctgcac
aacacagaagctgagacggaggagcatgaaggattagcaaaggctctcggtctaatcaaa
gacgtcatagttcaggtggacacccaggtcagtctttacgagaaggaagtacggctcagg
gagatcgcctccaaggtggagcccaagtcccttgggaaaatcaaagatggccgcgttttc
cggaaggaggacctttctcatgggcgccgaaaactcttgtatgagagcatggtcaactgg
aaagcagcatctggtcggcttaaagatattctagctctccttctcacggatgttctcgtc
ttgttgcaagaaaaggaccagagatacgtgttctccactgtggacaacaagccgtccgtt
atttcactgcagaagttgatcgtccgtgaggtggcgcacgaggaacgggccatgttcctc
atctgtgcctcctcaaacgaacccgagatgtacgaaatccacacggcctcaaaagaagac
cgcaacacgtggatcacccacattcgtcaggccggggagagctgtccacatatagaagag
agattgtttagcgaggaagaggaagccagagtcgcccgtttccgagagtttcaagaccgc
ctgacgctgaaggatgctcagatcgcgcagggtctcacagagaagctgcagttgttcgca
gagctggctgaatccgtggcgggtttagaggacgccggctctcgctcccgtctgcttctg
cggggcgacgcctctgacctccagcagggggagcagctgctcaaaggagccattactgaa
gtggagaacctgcagaacctcctttcatctggagctcgggaagcagcgccgcagaccgag
gggaaccagagtccgtccttgagtttacttccacgcagagcagacaccttcggcggctat
gatagcattcccagcatactgcctaagaatggcagtattaagaagaaggttgctggggcg
gccggcaggaccagggaccggagtcaacgggccagctctgatccgcagctcaaagaggtt
tactcgtgtcaagaccaggatgagctggacgaggcctcttcccccggctcgcacaaaacg
tggtcggcctgtaaatttccggagtccgagttctacgagcgagtgctgctgctgtcccag
aggctgtacagtttacaggccataatctctcagcaggacagccacatcgagcttcaacgg
gcctctctcctcaccgccgagcgggaccgccccggcagccggagccgcggcacggacgtg
ctcctggagcaggagaagcagcgtaacctggagaagcaccgcgaggagctggccaacttc
cagcggctacagagccagcaccgtcaggagcaggcacgctgggaacgggagcgggagaag
caacggcgccaagccgaggcagccgagcagcgtctgaaggaacgggaggaggagtgccgg
cggctggagctgcgcttggtcgaggagaagcaggagctcgagaggcaaagacagacctac
cagcaagacctggagaggctgagggagtccacgcgcaccgtcgagaaagagaaagagcga
ctggatcaacagaggaagttgaagaagcaccacacggtgccaaatacggcagcgctgtac
gcacaggaagttggacagctttccagttcctccagcttcaacggagagctgctgctcggc
ggagcaggggaccagacgtttcctcaaaagtcgcaccttcgggcctctctctccgtgtcc
cccgccgactactcggagcgccccgaagttcactcgcgccgcgagagctcctgcggcgcc
ctaacggccaagacagaggttcccatacatctcatcagcaccacaaaccagctgcacaag
cagggcagtgtccagcagcaaatacccaccaaactggccgccctcagcaagggcaaagag
aagagtgggaagggcaagagttcacaccgcgccgatagtttggcttctgctgacatcaag
cagatgctgcccatcaagctgtcatcgagggattcggacggaggtcacaaagcgcgccgg
cccatcagcccccaccaacctcaacattcgcactcagattccctcagccctccagacgct
caggcggacgccccgtctagcctcgcgcccgccgttctcaaaacccacaaccaggcctcc
cagcccaccctttcgtatactgttagcgacgaagccgccaaggaagacgttatctacttc
tga
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