Puntigrus tetrazona (Sumatra barb): 122330995
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Entry
122330995 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
122330995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122330995
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122330995
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Baculo_PEP_C
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
122330995
NCBI-ProteinID:
XP_043084333
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All DBs
Position
25:complement(8436775..8449214)
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AA seq
1327 aa
AA seq
DB search
MTEIDSKTPGMVGWIVQGLGLSMPQPALKNKEGCLEDGKVVQNAGSARSAPGDLVLEEVD
SEDEAQEKYTCPTANSLPNSQPQSQPQTPWSPEQSLPLSVTTPSQAHIELEDAETQTARW
TPMIENIRREAEDTAILIMEERLIQERLAMARMAEEVARQTAEMAVRELAQARFGIQTIA
EEPEDVDQELQVLQEEESDVEVIRNQIAECQVPSVKEFLPEGQEAEAVDTAFTVQTPVEE
FKSSSPLQEEPEPEPEELHDEEELRDSTEAEEEPEPITQQPQSITSTSASPTDSQVESTA
SEEESSAPTRCDALKRCFMRVPYAPQALDNFSQFLTDIGFTLPKVPSMPNLPPALSQITQ
QLPSLPPQLAQLPQQISQRFSKITPQFPNQTLFSAPHFPSVPVQLSSLSQQLSNIPQQIS
NLPQKVSNFPQRFTSIPRFSILPQQVSNIPQQLSSIPQKISSIPQKITSIPQCAQQCFSN
IQSRLKLRPEQDAQEQPQKSRDLELDRLVRQSPLQSPRTPSPSSPSSVLDLPNVPSYPRL
PPITPSRQLSGVSNPAFHVEDNPTSARPSVSSRLSVHPAVNVEDVDSDRGKGGRRSRPIP
PIINPQDPNLKTLTVPGARKANRTSKRLYSQDDEEEEELETAVRAWPSQSSISSADDGLN
QRPTSSASQTSTVVNERLQELVKLFKERTERVKEKLIDPDNSDDETPPASPAKQAPAPPP
PSEPPAEQKTEQEVPEAPAEKEEEKTKLLCCKLKPQSRIGRLLQYRFPSSIDPFTNLIYV
LWLFCVSLAFNWNAWMIPVRWAFPYQTPDNIHIWLLIDYLCDAVYILDILAFQPRLQFVR
HGDLVTGKKEMRNNYIKAVRFKLDVFSLLPLELLYFKTGINPLLRLPRILKFMSFFEFNK
RLEAILTNAYVYRVIRTTTYLLYAVHCNACLYYWGSSYEGLGFSDWTYDGTGNSYFRCYY
FAVKTLLTIGGLPEPKTLFEIVFQLINYFIGVFVFSIMIGQMRDVVGAATAAQTNYRACV
DNTVKYMASYRIPKDVQNRVKTWYSYTWQSQGMLDEQELLDQLPDKMRLDIAVDVSYNII
SKVPLFQGCDRQMIFDMLKRLRSVVYLPGDYVCKKDEVGREMYIIKAGEVQVVGGPDGKT
VFVTLKAGAVFGEVSLLAVGGGNRRTANVVARGFANLLILTKRDLNEIMVHYPESQKLLR
KKARKMVMKDKKPAEKKEEEKEPIPIIPPRAETPRLLKAALEMTEKTGMKGTWSKLKDRS
NRSSVSLQHSISSSAAPNSPVHEAHSDQDADTLSQISDSSMQIPTTPTDVGDRNVFAEDG
PAEEETK
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgacagagatcgattcaaaaactcccggcatggtgggctggattgttcagggtctgggc
ctttcgatgccacagccagcgcttaaaaacaaagaaggatgtttggaggacgggaaggtt
gtgcaaaatgcaggcagtgctcggtcagctcccggagacctcgttcttgaggaggtcgac
tctgaagatgaagctcaagaaaagtatacatgtccaacagcgaactcactgccaaattca
caacctcagtcccaaccacaaacaccttggtcaccggaacagtctcttccactgagcgtc
accacaccctcacaagcacacatagaactggaggacgcagaaactcaaactgcacgatgg
acgcccatgatagagaacatcaggagagaggcggaggacaccgccatattaattatggag
gaacggttgatacaggagcgtctggcgatggctcggatggcagaggaggtggcacggcag
acagcagagatggctgtcagggagttggcacaggcccggtttggcattcagaccattgca
gaagagccagaagatgttgatcaagaattacaagtgctacaggaagaggaaagtgatgta
gaagtaatacgaaatcaaattgcagagtgccaggtaccttcagttaaggagtttcttcca
gaaggacaagaggcagaggctgtagacactgcttttacagttcaaacccctgtggaggag
ttcaagtcctcttcacctctacaagaggaaccagagccagagcctgaggagcttcatgac
gaggaggagctcagggactccactgaagcagaagaagaacctgagccgatcactcagcaa
cctcagtctattaccagcacctctgcctcaccaactgattcacaggtggagagtacagct
tctgaagaagaaagcagtgctcctaccagatgcgatgcactgaagagatgtttcatgcgt
gtaccatatgcaccacaggcccttgacaactttagccagttcctgacagacatcggcttc
actttgcccaaagtgccttccatgcccaatctgccccctgctctctctcaaatcacccaa
cagctgccatcactccctccccaactggcacagctaccgcaacaaatttcccagcgattc
tccaaaatcaccccacaattcccaaaccagacgctttttagtgctcctcattttccaagt
gtccccgtgcagttatccagcctttcacaacagctgtccaacattccgcaacaaatttca
aacctcccacaaaaggtatccaactttccccaaaggttcaccagcattccacggttttcc
atccttccacaacaggtctccaacattccgcaacaactctccagcattccacaaaaaata
tccagcattccacaaaagataactagcattccacagtgtgcccagcagtgtttctccaac
attcaaagccgcctcaaacttaggccagaacaggatgcccaggagcaaccacagaagagt
agggatctggagttggaccgtcttgtccgccagtccccgctccaatccccccgtacccct
tcaccctcttccccaagctcagtcctagacttgcccaatgtgccctcttacccccgtctg
ccacccatcaccccttccaggcagttatctggcgtttccaaccctgccttccacgttgag
gacaaccccacttctgctagaccctcagtgagctccagactgagtgtgcacccagctgtg
aatgtcgaagatgtcgactcagaccgagggaaaggaggaagacgatctcgcccaatacca
ccaataataaacccacaggaccctaacctcaaaaccctcactgtccctggtgcccgtaaa
gccaatcggaccagcaagagactttactcacaagatgatgaggaagaagaggagttagaa
actgcagtccgggcatggccaagccagagtagcatctcaagcgcagatgatgggctaaat
cagcggccaacctcttcagccagccaaactagtactgtagtaaatgagaggttacaggag
ctggtcaagctgtttaaagagagaacagagcgagttaaagaaaagctgatcgatccagat
aactcagatgatgaaacaccacctgcctccccagccaagcaagctccagctcctcctcct
ccttctgaacctccagcagagcagaaaacagagcaggaggtaccggaggctcctgctgag
aaagaagaggagaaaacaaagctcctatgctgtaaactgaaacctcaatccaggattggt
cggcttctgcagtaccgttttccatccagcatcgaccccttcaccaatctcatctacgta
ctttggctgttttgcgtgtctttggcgtttaactggaacgcgtggatgattcctgtgcgt
tgggcttttccatatcaaacaccggataacatccatatttggctgttgattgactactta
tgtgatgccgtttacatactggacatccttgcctttcaacccagactgcagtttgttcgt
catggagaccttgtgaccggcaagaaagagatgagaaataattacatcaaagctgtacga
ttcaagctggatgtgttcagtctacttcctctggagcttctctacttcaaaacagggatt
aatccacttctgcgcttacccaggatcctgaagttcatgtctttctttgagttcaacaag
cgtctggaagctatactgaccaacgcttacgtttacagagttattcggaccaccacctac
ttgctgtatgccgtccactgcaatgcctgtctgtactactggggctcttcatatgaaggt
ctgggtttctcagattggacctatgatgggaccggcaatagttattttcgctgctactac
tttgctgtgaagactttgcttaccatcggtggtctgccagaacccaaaacactttttgag
attgtgtttcagctcatcaattactttattggagtgtttgtgttctccatcatgattggt
cagatgagagacgttgttggtgcagcgactgcggctcagacaaactatcgtgcctgtgtg
gataacactgtgaagtacatggcctcctatcgcatccctaaagatgtgcagaacagagtg
aaaacctggtacagctacacgtggcagtcccagggcatgctggatgaacaagagctatta
gatcaactacctgacaagatgaggctggatatagcagtggacgtcagctacaacattata
agtaaagtgccacttttccagggctgtgatagacagatgatcttcgacatgctgaagagg
ctcagatcagtggtgtacctcccaggagactatgtctgcaagaaggatgaagtgggtcgt
gagatgtacattataaaggcaggggaagtccaggtagtcggtggtcccgatggaaagaca
gtgtttgtgaccctgaaagcaggagctgtgtttggagaggtcagcttgcttgctgtgggt
ggaggaaaccggcggacagctaatgtggtagcacgtggttttgctaacctcctcatcttg
accaaaagggacctgaatgagatcatggtgcactatccagagtcccagaaactgctgcgc
aagaaagcaaggaaaatggtgatgaaggataaaaagcctgctgagaagaaagaggaagaa
aaggagcccataccgattattcctcctcgtgccgagacgcccagactgttaaaagctgcg
ctggagatgacagaaaaaacaggaatgaaagggacatggtccaaacttaaggacaggagc
aacagatcaagtgtctccttgcagcactccatctcttcctctgcggcgcccaactctcca
gtccatgaagcgcactcagatcaagatgcagacactctgtctcagatatcagacagctca
atgcaaatccccacgacccccaccgatgttggagacaggaatgtatttgctgaagacggc
ccagcggaggaggaaactaaatag
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