KEGG   Puntigrus tetrazona (Sumatra barb): 122333667
Entry
122333667         CDS       T08985                                 
Name
(RefSeq) collagen alpha-2(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04510  Focal adhesion
ptet04512  ECM-receptor interaction
ptet04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    122333667
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    122333667
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122333667
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ptet00535]
    122333667
Proteoglycans [BR:ptet00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   122333667
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 122333667
NCBI-ProteinID: XP_043087302
LinkDB
Position
Unknown
AA seq 518 aa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NT seq 1557 nt   +upstreamnt  +downstreamnt
tgtccaaccaactgtccacctggaccaaaaggtcctcagggcctacagggagtgaaggga
cataaaggtcgctctggggtactgggagatccaggaagcattggaaaattgggcataaag
ggcgaattcggcatctccggtgaacaaggaataccaggccctccaggtccacagggtctg
agagggtatccaggaatggtggggcccaaaggcgagtcgggaccacgtggttataaaggg
attttaggaccaatcggcatccctggacgccctggtgaagagggaccccaaggaccacct
ggagagcctggtgacaaaggcgaaattggagagcgtggagttcgagggcctcagggggtg
gtcggaaagaagggagagaatggtcttccaggaattgatggaaaagatggcactcctggt
atcccaggaataaagggagctgcaggacaaaatggaagacctggagcccctgggcatcag
ggagatgctggtttgcctggtatgcctggagccaagggtgaaattggagttaagggtgag
accggacccagaggctcgatgggaatgcagggttctccgggacctcaaggagagcctggt
cctccaggggaagctggcatggagggagtaccaggaccaaagggtgacaggggcgaaaga
ggagcagttgggccttctggtattgttggcttgcctggcagtaagggagagaggggaccc
atgggcgtcccaggtgctcagggtctaactggaactaagggtgacaagggattccaaggc
aaagtgggatcaaagggagacgttggtgatcctggagtagagggattggctggggagaaa
ggagagaagggacaatctggggagcctggacccaagggacagcaaggtgtgaccggcgat
caagggcacaacggtcctaccggagaccccggtaaaccaggagaccagggtccttcaggc
ttacccggtccacgtggcctgcacggagaaagaggagttccagggatgccaggaatacaa
ggagcacctggtcgtgatgctacagatcagcacatcattgacgtggtcctgaagatgctt
caagagaagttagcggcattagcggtgagctctaagagagccgtgctgggtggagctggt
gtgatgggacctccaggtcctccaggaccacctggacctccaggacctcagggacctcat
ggactgacaggcggccgtggcattcctggcataatcgggggctcaggccagataggaaac
accggccttaaagggaagaggggtgcaaagggagagagaggagatcctggacgtccacat
cctggccaaccgggaccacctggactgccaggtcctccaggtcttgacggtgttgcacgt
gacggtaggccaggcgagcgaggaccccagggtgcagtgggtgagccaggccgttctgga
aaagctggtccttctggtcttcctggatattgtgaagcagctgcatgtttggcagcgtcc
gcctacacttctcccagattacaagaggcgggaacagtaaagggcccatccacttaa

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