Puntigrus tetrazona (Sumatra barb): 122333667
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Entry
122333667 CDS
T08985
Name
(RefSeq) collagen alpha-2(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04510
Focal adhesion
ptet04512
ECM-receptor interaction
ptet04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122333667
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122333667
09142 Cell motility
04820 Cytoskeleton in muscle cells
122333667
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ptet00535
]
122333667
Proteoglycans [BR:
ptet00535
]
Extracellular matrix (ECM) proteoglycans
Others
122333667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
122333667
NCBI-ProteinID:
XP_043087302
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search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NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
tgtccaaccaactgtccacctggaccaaaaggtcctcagggcctacagggagtgaaggga
cataaaggtcgctctggggtactgggagatccaggaagcattggaaaattgggcataaag
ggcgaattcggcatctccggtgaacaaggaataccaggccctccaggtccacagggtctg
agagggtatccaggaatggtggggcccaaaggcgagtcgggaccacgtggttataaaggg
attttaggaccaatcggcatccctggacgccctggtgaagagggaccccaaggaccacct
ggagagcctggtgacaaaggcgaaattggagagcgtggagttcgagggcctcagggggtg
gtcggaaagaagggagagaatggtcttccaggaattgatggaaaagatggcactcctggt
atcccaggaataaagggagctgcaggacaaaatggaagacctggagcccctgggcatcag
ggagatgctggtttgcctggtatgcctggagccaagggtgaaattggagttaagggtgag
accggacccagaggctcgatgggaatgcagggttctccgggacctcaaggagagcctggt
cctccaggggaagctggcatggagggagtaccaggaccaaagggtgacaggggcgaaaga
ggagcagttgggccttctggtattgttggcttgcctggcagtaagggagagaggggaccc
atgggcgtcccaggtgctcagggtctaactggaactaagggtgacaagggattccaaggc
aaagtgggatcaaagggagacgttggtgatcctggagtagagggattggctggggagaaa
ggagagaagggacaatctggggagcctggacccaagggacagcaaggtgtgaccggcgat
caagggcacaacggtcctaccggagaccccggtaaaccaggagaccagggtccttcaggc
ttacccggtccacgtggcctgcacggagaaagaggagttccagggatgccaggaatacaa
ggagcacctggtcgtgatgctacagatcagcacatcattgacgtggtcctgaagatgctt
caagagaagttagcggcattagcggtgagctctaagagagccgtgctgggtggagctggt
gtgatgggacctccaggtcctccaggaccacctggacctccaggacctcagggacctcat
ggactgacaggcggccgtggcattcctggcataatcgggggctcaggccagataggaaac
accggccttaaagggaagaggggtgcaaagggagagagaggagatcctggacgtccacat
cctggccaaccgggaccacctggactgccaggtcctccaggtcttgacggtgttgcacgt
gacggtaggccaggcgagcgaggaccccagggtgcagtgggtgagccaggccgttctgga
aaagctggtccttctggtcttcctggatattgtgaagcagctgcatgtttggcagcgtcc
gcctacacttctcccagattacaagaggcgggaacagtaaagggcccatccacttaa
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