Puntigrus tetrazona (Sumatra barb): 122346139
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Entry
122346139 CDS
T08985
Symbol
trim32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122346139 (trim32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122346139 (trim32)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122346139 (trim32)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122346139 (trim32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_4
zf-RING_4
TEN_NHL
Baculo_IE-1
Haem_bd
Motif
Other DBs
NCBI-GeneID:
122346139
NCBI-ProteinID:
XP_043096761
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All DBs
Position
5:28380393..28388725
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AA seq
661 aa
AA seq
DB search
MATPTSLDPDLVREVLECPICLETYNQDQLRPKLLQCGHSVCRQCLEKLLASTINGVRCP
FCSKVSRMSSISQLADNLTVLKIIDCASSCGSTMGLMCKSCKNRLPRQYCNDCSIVLCDI
CKNDGHQHQGHVVQAIRMAAEQRRKDINGKLANLREAMGNIQKKKAAIDNVTKSLRLKYK
AVQQEYAKAELRLQEELGRSRRAFATSLAEIEKLNAQILEEQTYLLNIAEVQVVSRCDYL
TMRMKQTDIALLEEGSNNEEEELDLKTNLPVLLKLQDPEFVKTDCSKPLDVGQLTTKPCT
VNAEEEDRLDFATSVAAPLDIYRDIDMESAVEEAVCASPGSFKSKSVDGGGPSPGASGGQ
LCQFVKKMGCKGNLPGMFNLPVSICVTPQGEVLVADRGNYRIQIFNRKGFQREIRRNPSS
IDNFVLSFLGADLPNLIPLSIAITAQGLIGVTDNYDNSVKVYTTDGHCIACHKNQLIKPW
GIAAMPSGQFVVSDVEGGKLWCLAVDRNVGVVNYNRLCSAVRPKFVTCDSSGTVYFTQGL
GLNIENRHNEHHLEGGFSIGSVGMDGQLGKQLSHFFSETEDFRCITGMCVDSNGDLIVTD
SGRKEILQFPKEGGYNILIQEGLTCPVGVAVTQKGQLLVLDCWDHCVKVYTYLQRRRSST
C
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaccaacgtctttagatccagatttggttcgggaggtgctagaatgtcccatt
tgtctggagacctacaaccaggatcagcttcgacccaaactgttgcaatgtggtcactct
gtgtgtcgtcagtgccttgagaaactcctcgccagcacgataaatggcgtgcgctgcccc
ttctgcagcaaggtgtctcgtatgagtagcatttcccagctggctgacaatctcactgtg
ttgaagatcatcgactgtgcaagttcatgtggctcaaccatgggtctcatgtgcaagtct
tgtaaaaaccgtctgccccggcagtactgcaatgactgcagcatcgtgttgtgtgatatt
tgtaaaaacgacggtcaccagcatcagggtcatgtcgtacaggcaattcgcatggctgcc
gaacagcgccggaaggacatcaacgggaagctcgctaacttgcgggaagcaatgggaaac
attcagaagaagaaggcagctattgacaacgtgacaaaatccctcagactgaagtacaag
gctgtacagcaggaatacgcaaaggctgagttgcggctccaggaggaacttggccgttcg
cgtcgtgcctttgctacctccttggccgaaatagagaaactcaatgcccagattctggag
gaacaaacgtacttgcttaatattgctgaggtgcaggtggtgtctagatgtgactatcta
accatgaggatgaagcagactgatattgctctactggaggaagggagcaacaatgaagaa
gaagagttagacttaaaaaccaatctgcctgttcttctaaaactacaagaccctgaattt
gttaaaacagactgctcgaaaccattggacgttgggcaactgaccacaaaaccctgtact
gtcaatgctgaggaagaagacagacttgattttgccacttctgttgccgcccctttagac
atttaccgtgatattgacatggaatcagcagtggaagaggccgtttgtgcttctcccggc
agctttaagtctaagtctgtcgatggtggtggaccttctccaggagcttctggtgggcaa
ctctgtcagtttgtgaaaaagatgggctgcaagggcaatctgccgggcatgttcaacttg
ccggtaagcatttgtgtcacgccgcagggtgaggtgctcgttgccgaccgagggaactac
cgcatccagatcttcaaccgcaagggcttccaaagggagatacggcgcaacccaagcagc
atcgacaactttgtcttgagcttcctaggtgctgacctgcccaacctcatcccgctatcc
attgctatcactgctcagggcctcatcggtgtcactgataactatgacaactctgtaaag
gtttacaccactgatggccactgtattgcttgtcacaagaaccagctcatcaagccatgg
ggaatcgcggccatgccttcgggccagtttgttgtgtcagatgtcgaggggggaaagctg
tggtgcctggccgtggatcgtaatgtaggagttgtgaattacaaccgcctatgttcggct
gtcaggcccaaatttgtaacttgtgactcctcgggtacagtctacttcacacagggctta
ggtctaaacatcgagaatagacacaatgaacaccaccttgaggggggtttctcaatcggc
tctgtgggaatggatggccagttgggaaagcaactcagtcacttcttttcagagaccgaa
gactttcgatgcattaccggcatgtgcgttgactccaacggggacctgattgtcacagac
agcggccgtaaggagatattgcagtttcccaaagaaggtggctataatattcttattcag
gagggcctaacctgccctgtaggggtagctgttacccaaaagggacaactgcttgtctta
gattgctgggaccactgtgtgaaggtctacacttacttgcaaaggagacgttcctctaca
tgttaa
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