Puntigrus tetrazona (Sumatra barb): 122353902
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Entry
122353902 CDS
T08985
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122353902 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptet02000
]
122353902 (slc6a11b)
Transporters [BR:
ptet02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
122353902 (slc6a11b)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
122353902
NCBI-ProteinID:
XP_043107727
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Position
11:721810..741292
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AA seq
617 aa
AA seq
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MTAEKTIPIINGKADDSMDPEAASPSAVRSNDKKVVNERGQWNNKVEFVLSVAGEIIGLG
NVWRFPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEG
IGYATQVIEAHLNVYYVVILAWAIFYLFNCFTTELPWASCGHYWNTENCVDFNNESIANL
TNPYATSPVMEFWERRVLSISSGIEEVGSLRWELAICLAIAWVICYFCIWKGPKSTGKVV
YVTATFPYFMLLILLLRGITLPGAANGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICL
GCLTALGSYNSYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESG
PGLAFIAYPKAVTMMPWSPLWACLFFMMLIFLGLDSQFVCVESLVTAIVDMYPKTFRVGY
RRELLILGMSVASFFVGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWIYGSD
RFYLNIEDMIGYKPIFFIKWCWKFFTPGICAGIFLFFLIKYKPLKYNNVYTYPDWGYGIG
WMMAMASMVCIPLGILFQIWKTEGTFRERIKKLTTPSADLRMRGRLGSRGPCAINDADAK
IRADGKISTITEKETHF
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgaaaagacgattcccatcataaatggaaaagcggacgattcgatggacccc
gaagcggcgagcccgagcgcagtgcgcagcaacgacaagaaggtggtgaatgagagggga
cagtggaataataaggttgagtttgtgttgtcagtggctggagagattatcggccttggc
aacgtttggaggttcccatatctgtgttacaagaacggcggaggtgctttctttgtgcct
tatgtcatcttcttcgtctgctgtggaatccctgtcttcttcttggaaacagcgctaggt
cagttcactagtgaaggaggcatcacatgttggcgaaaagtctgcccgctctttgaaggc
atcggctatgcgacccaagtcattgaagcccacctgaatgtttattatgtggttatatta
gcttgggccattttctacctgttcaattgctttacaacagagctgccctgggcatcatgt
ggtcactactggaacacggaaaactgtgtggattttaacaatgaaagcattgccaacctc
accaacccatacgccacatcaccagtcatggagttttgggaacgccgtgttctcagcata
tcctctggaattgaagaagttggcagccttcgctgggaacttgctatctgtcttgctata
gcctgggtcatatgttatttctgcatttggaaaggtcccaaatcaactggaaaggtggtg
tacgtcactgcaacctttccttacttcatgctgttgatccttcttcttcgaggaatcacg
cttccaggagctgctaatggaattaagttctacctgtatcctgacatctctcgtctgtca
gaccctcaggtgtgggtggatgcaggaacccagatcttcttctcgtatgctatatgtctg
ggctgtcttacggctctcggcagctacaacagctacaacaacaactgctacagggactgc
atcatgctgtgctgtctgaacagtggcacgagttttgtggcaggatttgccatcttttct
gtcttgggcttcatggcatatgaacagaatgtgccgatagaagcagtggcagagtcaggt
cctggtttagcgttcatagcgtatcctaaagctgtgaccatgatgccgtggtctccgttg
tgggcctgtctgttcttcatgatgctcatcttcctcggtcttgacagtcagtttgtgtgt
gtggagagtctcgtgactgcaatcgtggacatgtatcccaaaaccttccgcgtgggatac
cggcgagagcttctcatcctgggaatgtctgtggcttcgttcttcgtgggtctaataatg
ctgacagagggtggcatgtacgtgttccagctctttgactcgtatgcagccagtggcatg
tgtctgttatttgtggccatctttgagtccatctgcattggctggatctatggtagtgac
aggttttatctgaacatcgaggacatgattggatacaagcccatcttcttcatcaagtgg
tgctggaagttcttcacaccgggcatctgtgctggcatctttctgttcttcttgatcaag
tacaagccgctcaagtacaataatgtgtacacgtatccagactggggttatggcattggc
tggatgatggccatggcctctatggtttgcatccctctgggaatcttgtttcagatctgg
aagacggaaggaactttccgtgagaggatcaaaaagctgaccacacccagcgctgacctg
agaatgaggggacgcctcggctccaggggtccctgcgctatcaatgatgctgatgccaaa
atcagggcggacggcaagatctccaccatcacagagaaggagacgcatttctaa
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