KEGG   Puntigrus tetrazona (Sumatra barb): 122356132
Entry
122356132         CDS       T08985                                 
Symbol
col9a1b
Name
(RefSeq) collagen, type IX, alpha 1b
  KO
K08131  collagen type IX alpha
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04510  Focal adhesion
ptet04512  ECM-receptor interaction
ptet04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    122356132 (col9a1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    122356132 (col9a1b)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122356132 (col9a1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ptet00535]
    122356132 (col9a1b)
Proteoglycans [BR:ptet00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   122356132 (col9a1b)
SSDB
Motif
Pfam: Collagen Laminin_G_2 Laminin_G_1
Other DBs
NCBI-GeneID: 122356132
NCBI-ProteinID: XP_043110553
LinkDB
Position
13:complement(15227332..15253357)
AA seq 922 aa
MIWREVCLYVLWDLIKRCFCTGLHAHIMPFSSMSHLQTDQTLCPLTKDGNDLFPGFYIMT
QFNIAELARRGTVKKVPGTTSQHIAYRIGPEFNFRINTRSAFPTGLPEELAFSATYRMSG
NTHKKSWNLWQMQDLNGNEQLAVRLNGEALSVEFSYRTQENRQMTALFPYQTLLFNSQWH
KIVLLVKKGSVSLITDCTATDSQQLAPRGQVNLDGFTHIGKMKDNSAIAVPFELQSMLIH
CDLNIPQRDTCGDLPARREISEAEFQRAGGGPAGPPGVPGIDGIDGDRGDTGEDGSAGPD
GDLGKPGSAGLPGLPGADGLTGPTGEPGPDGPPGQKGEPGKPGPRGGAGVGPDGPIGPPG
PGGLPGEQGKVGPPGAMGVRGPQGPRGPTGPRGAAGMLGGTMELCPNACPPGSPGHPGLP
GMKGHKGVKGESGEPGKQGHKGEEGDQGAPGEVGTQGPTGPQGIRGSTGMLGSKGETGPR
GVDGDPGPQGVAGATGDRGQRGVMGESGPKGEQGPQGPRGNSGLPGPKGDGGLPGVDGRE
GIPGMPGTKGAGGKPGSPGEVGLQGLPGLPGSPGPKGGGGEKGNAGQPGLIGTMGSAGKP
GERGEQGEGGPIGPIGQPGDRGEQGPPGPMGKPGARGPKGDLGLPGLPGPPGLPGIKGDR
GDSGEPGPKGEQGAQGDEGTAGDKGDVGDPGQPGAKGEVGNLGDPGNRGPEGARGQPGIE
GPPGSPGPRGMQGNRGAPGPRGTQGPAGKEPSDQHIRQVCMRVMQEQLAQLAASLRRPES
GAVGLPGRPGPPGPPGPPGDSGFPGHAGARGLPGLKGPPGLLGLKGPKGEMGDRGQRGPT
SRGPKGMPGPPGLPGEPGKPGYGQDGRDGERGPPGTPGQPGVPGPPGSAGPPGYCDPSAC
NLSAGAAHQSLKDSSMKGPGGN
NT seq 2769 nt   +upstreamnt  +downstreamnt
atgatctggagggaagtttgtctctacgttttgtgggatttgatcaaacgatgcttctgc
actggtcttcatgcgcatatcatgccattttccagtatgagtcacctgcagacggaccaa
actctgtgtcctctaactaaagatgggaatgacttatttccaggtttttacataatgact
cagttcaacattgccgagttggcgaggagagggacggtgaagaaggtgcccggaacgaca
tctcagcatatcgcatataggattggccccgagtttaacttcaggataaacaccagatct
gcatttcccacggggctgcctgaggaattagcattttctgcaacctatcgaatgagtgga
aatactcacaagaagagttggaatttatggcaaatgcaagatctgaatggaaatgaacag
cttgcagtcagactcaacggggaggccctgtcggtggagttctcttacagaacccaagag
aacagacagatgacggctttattcccttaccaaacactcctcttcaattctcagtggcac
aagattgtattgcttgtcaaaaaaggttctgtgagcctgataacagactgcacagcaaca
gattcacagcagctggcacccagaggacaagtaaacctagatggattcacgcatattgga
aaaatgaaggacaattcagcaatagctgtgccgtttgagctgcagtcaatgctgatccac
tgcgacttaaacatcccgcagagagacacatgtggtgaccttcctgcaaggagagagata
tccgaggcagagtttcagagggctggaggcggccctgctggtcctcccggtgtgcctgga
atagatggtattgatggtgatagaggcgacaccggtgaagacggttcggctggtcctgat
ggagatcttggaaaacctggttctgctggacttcctggattacctggagctgatggattg
actggccccacaggagaaccaggccccgatggccccccaggacaaaagggagaacctggc
aaacctggacccagaggaggggcgggtgttggacctgatggaccaattggcccaccagga
ccaggaggacttccgggtgagcagggaaaagttggaccccctggagccatgggtgtgaga
gggccacaggggccccgtggaccaacaggcccccgtggtgctgcagggatgctgggtgga
acaatggaattgtgccctaacgcatgcccacctggatctcctggtcatcctggcttgcct
ggaatgaagggtcataaaggggtgaaaggagaatctggagagcctggcaaacaagggcac
aagggagaggagggagatcagggggcacctggagaggtcggaactcaaggcccaactggg
ccgcagggaattcgaggttccaccggtatgcttggctccaaaggagagacggggcctcga
ggtgttgatggggaccctgggcctcaaggtgttgcaggagccactggggatcgaggccag
agaggagtaatgggagaaagtggccctaaaggcgaacagggacctcaagggccaagaggc
aacagtggtcttccagggccaaagggagacggtggtttgccaggtgtggatgggcgtgag
ggaatccctggcatgccaggtaccaagggtgctggtggaaagcctggaagccctggggaa
gttggccttcaaggacttcctggtttaccaggaagcccaggaccgaaaggtggaggtggg
gaaaagggtaatgcaggacaaccgggcctcatcggtactatgggatctgcaggtaaaccg
ggtgaacgtggagaacaaggagaaggcggacccattgggcctattggacaacctggagac
cgaggagagcaggggccacctgggccaatgggaaaaccaggagcaagaggtcctaaaggt
gacttgggcttgcctggacttcctggaccaccgggcctgccaggaataaaaggagatagg
ggtgattcaggagaacctggaccaaagggagaacagggcgctcaaggtgacgaggggaca
gcaggagacaagggagatgttggtgaccctggccaacctggagctaaaggcgaagttggt
aacctaggggatccgggtaacagaggaccagagggagcccgtggacagcctggcatcgag
gggcctcctggtagtcctggaccacgtggcatgcaggggaacagaggagctccaggacct
cgtggcacacagggaccggcgggtaaagagccgagtgatcagcacatcagacaagtgtgc
atgcgcgttatgcaggagcagctggcccagttggcagccagtctgaggagaccagagtct
ggagcggtcggactgccaggcagacccggcccccctggtcctcccggacccccaggtgac
agcggcttccctgggcatgctggtgctagaggactcccgggactcaaagggcctccggga
cttttgggtctcaaggggccgaaaggtgagatgggagacagaggtcaaaggggacctacg
agtcggggacccaaaggcatgccgggacctccaggactaccaggtgaacctggaaaacca
ggatacggccaagatgggcgtgatggagaacggggtccgcctggtacccccggtcagccg
ggcgttcctggacctcctggttcagccggaccacctggttactgcgatccttcggcctgt
aatctgagcgcaggtgctgcccatcagtccctcaaagactctagcatgaagggaccgggc
ggaaactaa

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