Puntigrus tetrazona (Sumatra barb): 122357007
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Entry
122357007 CDS
T08985
Symbol
capn1a
Name
(RefSeq) calpain 1, (mu/I) large subunit a
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04141
Protein processing in endoplasmic reticulum
ptet04210
Apoptosis
ptet04217
Necroptosis
ptet04218
Cellular senescence
ptet04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122357007 (capn1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
122357007 (capn1a)
04217 Necroptosis
122357007 (capn1a)
04218 Cellular senescence
122357007 (capn1a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122357007 (capn1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptet01002
]
122357007 (capn1a)
Enzymes [BR:
ptet01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
122357007 (capn1a)
Peptidases and inhibitors [BR:
ptet01002
]
Cysteine peptidases
Family C2: calpain family
122357007 (capn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
122357007
NCBI-ProteinID:
XP_043112113
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All DBs
Position
13:complement(16594967..16606922)
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AA seq
704 aa
AA seq
DB search
MFTYGGISAQISANRLQAEGAGSFEQALHFQNQDFEALKQECLEGGYLFEDPCFPAEPPS
LGFKELAPYSSKTRGVEWMRPTELCDDPQFIVGGASRTDICQGALGDCWLLAAIASLTLN
ERLLHRVVPHGQCFEEDYAGIFHFQFWQFGEWVDIVIDDRLPVRDGELMFVHSAEGNEFW
SALVEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELRKAPRDLYRIISKALERGSL
LGCSIDITSAFDMESVTFKKLVKGHAYSVTALKQVEFRGHTERLIRVRNPWGQVEWTGAW
SDNSPEWDEIDPSEKDDLNIQMEDGEFWMSFSEFLRQFSRLEICNLTADALSDDDLSHWN
TIKFHGAWRRGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDEEVACSFLVALMQKDRR
RHRHHGQDMHTIGFAIYEIPEEYAGCQNVHLKKDFFLTHSSSARSETFINLREVSTRLRL
PPGEYIIVPSTFEPSKEADFVLRVFTEKQSQTEELDDEISADLEDEADITEDDIDDSFKS
LFAQLAGEDMEISVRELRTILNRVVSKHKDLKTDGFSMESCRTMVNLLDKDGSARLGLVE
FQILWNKIRKLLGIFREFDIDKSGTMSSYEMRMAVESAGFKLNNRLNQILVARYAENEVI
DFDNFVCCLIKLEVMFRSFQQLDRDGTGTAEMNLSEWLFMTMCG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgtatggaggaatctcggcccagatcagtgctaacaggctgcaggccgaaggc
gcgggctctttcgagcaggctttacacttccagaaccaggactttgaggcgctcaaacag
gagtgtttggaagggggctacctgttcgaagacccctgtttccccgctgaaccgccctct
ctcggcttcaaagagcttgccccgtattcctccaaaacccgtggcgtggagtggatgcgc
cctacggagctctgtgatgatccccagttcattgtgggtggagcctcacggacagacatc
tgtcaaggggctctaggtgactgctggctcctcgctgctatagcctcgctgactcttaat
gaaagactcctccacagagtcgtccctcatggccagtgttttgaggaagactatgctgga
atcttccactttcagttctggcagtttggtgagtgggtcgacattgtgattgatgatcgg
ctcccggtcagagacggagagctcatgtttgtccattcagcagagggaaatgagttctgg
agtgccttggttgaaaaggcctatgctaagcttaatggctcttatgaagctctctctgga
ggatccaccactgagggttttgaggatttcaccggaggggtttcggagatgtacgagctc
aggaaggctccgagagacctgtaccgaatcatcagcaaagccctggagagaggctccctg
ctgggctgctctattgatatcaccagtgcctttgacatggaatctgtgacgttcaagaag
ctggttaagggtcacgcttactcggtgactgctctcaaacaggtggaatttaggggtcat
acggagaggctaatccgcgtccgtaacccgtggggtcaggttgaatggacgggggcctgg
agcgacaactcccctgaatgggacgagattgatccgtctgagaaggatgacttaaacata
caaatggaggatggagagttctggatgtcgttcagtgagtttttgcggcagttctccagg
ctggagatttgtaatctcaccgccgatgctctgagtgatgatgaccttagtcactggaac
accatcaagtttcacggtgcctggcggagaggcagtaccgcgggaggctgccgaaaccac
cccaacacgttctggatcaatccacagtataagatcacattactggaggaggatgatgac
ccagaggatgaagaagtggcctgcagcttcctggtggctttaatgcaaaaagaccgtaga
cggcaccgccaccacggacaggacatgcacaccatcggctttgctatctacgagattccc
gaagagtatgcaggctgtcagaacgttcacctgaaaaaggacttcttcctgacgcactca
tcgtctgcccgctctgagaccttcatcaacctgcgggaggtgagcactcgtctccgcctg
cctccaggtgaatacatcatcgtcccctccaccttcgaacccagcaaagaggcagatttt
gtcctgcgagtcttcactgaaaagcagtcacagacggaggagttggatgacgaaatttcc
gctgacctggaggatgaggcagacatcacagaggatgatattgatgactctttcaagtcc
ttgtttgcccagctggctggagaggatatggagatatctgtccgtgaactcaggactatt
ctcaacagagtagtgtccaaacacaaggatcttaagacagatggcttcagcatggagtcc
tgcagaactatggtcaacctcttggataaagatggtagtgcacggttgggtttagtagag
tttcagatactctggaataaaataaggaagctactggggatcttcagggagtttgatatt
gataaatcaggcactatgagctcttatgagatgcgcatggctgtagaatcagcaggcttt
aagctcaataacagactcaaccagattcttgtagccagatacgctgagaacgaggtcatc
gattttgataacttcgtctgctgcttgatcaaactcgaggtcatgttcagatcatttcag
cagctggacagagacggaacgggaacggctgagatgaacctgtccgagtggctcttcatg
accatgtgcggttga
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