Puntigrus tetrazona (Sumatra barb): 122359939
Help
Entry
122359939 CDS
T08985
Symbol
phf1
Name
(RefSeq) PHD finger protein 1 isoform X1
KO
K11467
PHD finger protein 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122359939 (phf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122359939 (phf1)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122359939 (phf1)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
122359939 (phf1)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
122359939 (phf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
PHD_2
DUF4537
ASH2L-like_WH
Chromo
Motif
Other DBs
NCBI-GeneID:
122359939
NCBI-ProteinID:
XP_043116113
LinkDB
All DBs
Position
16:complement(19197851..19211186)
Genome browser
AA seq
505 aa
AA seq
DB search
MGGVSEGEDVLARWSDGLLYLGNVKRVDSVKQCCLVRFEDNSEFWVLRKDIHSFSSGGEE
VCCICDAPPLKEPLVNCLKCRHGYHPECHTPPIEPEVDPNSWICRQCVFAVATKRGGALK
RGRFARLMQIMKVRLPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGSCGQWFH
EACTQCLTKPLLYGDRFYQFQCSVCTNGPETIQRLPMTWVDLAHLVLYHLSLCCKRKYFD
FDHEIMSFANENWESLLLGTLSDTPRQDRCQNLLNALNSHKDRFVSGKEIKKKKCLFGLQ
VRAPPPLSSDQSPFIAEQPINITHRRSPTSLPCQRRAVGPEARKSKRRVTETQSCPTGVA
TNAIDLVPCCHGYVDGTSLYNPRKPEEEMSLGSPPKRMYALYHPSYNGSQDLSRTLHHYS
AEDPCRLPAPCLPFSLSSAHPTGQRYESCPSLFLHDVPPYPSTVGMGGPTPMGWGGNDSV
RILARRVTADGKVQYLVEWGNVSVY
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggggggagtcagcgaaggagaggacgttttagccaggtggagcgacggacttctgtac
ctcggcaatgtcaaacgagtggacagcgtcaagcagtgctgtttggtcagatttgaggat
aactccgaattctgggtcctcaggaaagacatccactcattctcttcaggtggagaggag
gtgtgctgtatctgtgatgctccgccccttaaagaacctctcgtaaactgcctcaaatgt
cgccacggttatcatccagagtgccacacgccgcccatcgaacctgaagttgaccccaac
agctggatatgtcgccaatgtgtcttcgcagtcgcaacaaagagagggggagcgttgaaa
agaggacgcttcgcgcggcttatgcagatcatgaaagtgcggctgccctatcagctgtca
tctttagactgggacccgcagcacttgaccaaccagcagcagtgttactgctattgcgcc
ggacctggagagtggaatctgaagatgttgcagtgtgggagttgtgggcagtggtttcat
gaagcttgcactcagtgcctgaccaaacctcttctctatggagaccgcttttatcagttc
cagtgctcagtgtgcacaaatggtccagagaccatccagaggcttccaatgacctgggta
gatttggcccatttggtgctgtatcacctctccctgtgctgcaagaggaagtattttgat
ttcgatcatgaaatcatgtcttttgcaaatgaaaattgggaatctttgcttcttggcacg
ctgtcagacacaccgaggcaagaccgttgccaaaacctgctcaatgctttaaattcccac
aaagacaggtttgtctcggggaaggaaataaagaagaagaaatgtctcttcggtcttcaa
gttcgggctcctccccctctgtcatcggaccaatcacctttcatcgccgaacagccaatc
aacatcacccacaggagaagtcccacgtcactgccctgccagcggagagcggtgggtccg
gaggcccgtaaatcaaagcgccgggtcactgagacacagagttgtccaacgggagtcgcg
acaaacgccattgacctggtgccatgctgccacggttatgtggatggaacaagcctgtat
aaccctagaaaaccagaggaagagatgagtttgggttcacctcccaagagaatgtacgcg
ctctatcacccttcatacaacggatctcaggacctgtctagaactctgcatcattacagt
gcagaggacccttgtcgacttccagccccctgccttccattctctctgtcctcggctcac
ccgaccggacagcgctatgaaagctgcccgtctctcttcctgcatgacgtgccaccttac
cccagtacagtcgggatggggggtcccacgccgatggggtggggcgggaacgactcggtc
aggatcctggccagacgcgtaacggcggacgggaaagtccagtacctcgtggaatgggga
aacgtgagcgtgtactga
DBGET
integrated database retrieval system
