Puntigrus tetrazona (Sumatra barb): 122362655
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Entry
122362655 CDS
T08985
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
122362655 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122362655 (cngb1a)
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122362655 (cngb1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Tom5
Motif
Other DBs
NCBI-GeneID:
122362655
NCBI-ProteinID:
XP_043120130
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All DBs
Position
18:13273197..13299638
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AA seq
1251 aa
AA seq
DB search
MFSWVIKVVPQPPASPGKLAEEDQTNAPTAAPDATKKQDAKQEPSKSTEEVSEENSSQSG
VLSWLSHGFSSALPQPVNSSKLGNNEVKHEGNAVSGSNSSDQAGMIGWIVQGLGKVVPQP
DEKYKGHTEPEEVTEVQEVREVRDAEPLPHIAVVEVVSDEEPEAANVPFSPRVIEWFKHG
FEKVVPQSPVHLRPPAGTDAPAQKAASAPVTPCKQEPAPAPAPTPAPAPPPAPAPAPAPA
PPPAPAALPPPAPAAPEQLKVAEESKGTNMVGWIVQGLGRIIPQPVQKPKEDSSDIVQNV
CILQDPCDMVLEEVDSDWEAQQREQGPGQEGSSLLQALPSILPHVLAMQEQEDAETQTER
WTPLIESIKKEAEETAIANIEERLQLERVEAARMAEDLARQAAELAVRQLEEEHTTQIVI
DTKPEEPDDEEQSLVDVCPAEPSPQESEVSDQAPQSPPPQPVTAQPQRASLPPEADQEEE
PAEEGCGENAHVKPALKVEEVEDGEMSVPQIIVPSELDSMTLTVPATNLTSRSKAVDSER
TQEEMAPGEEDDLNMSDLLNVNEGLERPASAASQTSIVVNERLQELVKLFKQRTDHARDR
LVDPDESDDESPSASPAKKPGEAPPPPPPPEEKKDDEEKAEEEVQIYEFMGYKFPVPQFK
MPQIPAWLRAILNYRFPSSIDPYTDLIYVVWLFFVTFAWNWNVWLIPVRCTFPYQTPDNI
HWWLLMDYLCDGIYLLDIFVMQPRLQFVRGGDIVCDKDDMRDNYRQTERFKMDVISLFPL
DLLYFFTGVKSLLRFPRLLKYNAFFEFNDRLEAVMSKAYIYRVIRTSAYLLYSLHCNACI
FYWGSDYEGLGSTKWVYNGKGNSYIRCYYFAVKTLITIGGLPDPTTVFEIVFQLVNYFVG
VFAFSIMIGQMRDVFGAATAGEAYYRHCVDSTVKYMSSYRIPREVQNRVKVWYDYTWKSQ
GMLDEQELLIQLPDKMRLDIAADVNYSIVSKVALFQGCDRQMIFDMLKRLKSVVYLPGDF
VCKKGEIGREMYIIKAGEVQVVGGPDGTTVFVTLRAGSVFGEISLLAVGGGNRRTANVKA
HGFANLFILDKKDLAEILVHYPESQKLLRKKAKKMLTKDKKPADEKGQAKDTGEVIPQRP
ETPKLYKAALEVGTGETFARLKESYKGATLEPSTPVSGRTSTAPVPPPSPMHRRSPIPRP
RVPDEDDMVSETTDSTMIIRMTPRVEGEEILSVEVSPGEGAEPEEQSKTED
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctgggtgataaaggttgttccccagcctccagcatctcctgggaagctggca
gaggaggaccagaccaatgctcccaccgcagctccagatgcgacgaaaaaacaagatgca
aaacaagaaccttccaagtcaacggaggaggtctcggaggaaaacagctctcagagtgga
gttttgagctggctctctcatgggttcagcagcgctctccctcagccagtaaactcctca
aaactgggcaacaatgaagttaagcatgagggaaatgcggtgagcggcagtaattcatcg
gaccaagctggaatgataggctggattgtgcagggactgggaaaagtggttccacagcca
gacgagaaatacaaaggtcacacagagccggaggaggtcactgaggtgcaagaggtcaga
gaagttcgcgatgccgagccgctgcctcacatcgccgtggtggaggttgtgtctgacgag
gagccagaagctgcgaacgtgcccttctctcccagggtaatagaatggtttaagcatggt
tttgagaaagtagtcccccagtctcctgtccaccttcgtcctcccgctggcacggatgca
cctgctcagaaggccgcttctgcaccggtgactccctgcaagcaagagccagcacctgca
cctgcacccacacctgctcctgctcctccacctgctcctgcacctgctcctgcccctgca
cctccacctgcccctgcagcccttcctccacctgcacctgcagctcctgagcagcttaaa
gtagccgaggaatccaaaggcaccaatatggttggctggatagtgcaggggctcggacgc
atcataccgcaaccagtgcagaaaccaaaagaggacagctctgacatcgttcaaaacgtc
tgcatcctgcaggacccgtgcgatatggtgctggaggaggtggactcggactgggaggcc
cagcagagggagcagggcccggggcaggagggctcttccctgctgcaggcgctgcccagc
atcctgcctcacgtgctggccatgcaggagcaggaggacgcagagacccagaccgagcgc
tggacgccgcttatcgagagcatcaagaaggaagccgaggagaccgccatagccaacata
gaggagagactgcagctggagcgcgtggaagcggctcgcatggcggaggatctggcccgg
caggccgccgaactggccgtcagacagctggaggaagagcacaccacgcagatcgtcatc
gacaccaaacccgaagagccggacgacgaggagcagagcctggtggacgtgtgcccggcg
gagccctcgccgcaggagtctgaggtctcagatcaggctccccaaagtcctccgccgcag
cctgtgaccgctcagcctcaacgggcatctttacctcctgaagctgaccaggaagaggaa
cctgctgaagaaggatgcggagaaaacgcccatgtgaagccagcactgaaggtggaggag
gtggaggacggagagatgagcgttcctcaaatcattgtgccctcagagttagactcaatg
accctcactgttcctgcaaccaatctgacatcccgcagtaaagctgtggattcagaaaga
acgcaggaggagatggctcctggagaggaagatgacttgaacatgtctgatctgcttaat
gtgaatgaaggtcttgagcgcccagcgtctgcagccagccagacaagcattgtcgtgaat
gagcgtctgcaggagctggtcaagctgtttaagcagcgaacggaccatgcgagagacaga
ctggtcgatccagatgagtctgatgatgaaagcccttcagcatctccggccaaaaagcct
ggtgaagccccacctccaccacctcctccagaggaaaagaaagatgatgaggagaaggct
gaagaggaggttcaaatctacgagtttatgggatacaagttcccggttcctcagttcaaa
atgccccagattcctgcgtggctgagagccatcctgaactaccgtttcccatccagcatt
gatccctacacagacttgatctacgtggtgtggctgttctttgtgacgttcgcgtggaac
tggaatgtttggctgatcccggtgcgctgcactttcccgtaccagacgcctgacaacatt
cactggtggctgctgatggattacttatgtgacggcatttatcttctcgacatcttcgtt
atgcagcccagactgcagttcgtgagaggaggggacatcgtgtgtgacaaagacgatatg
agagacaactacaggcaaacagaacgattcaagatggatgtgatcagtctctttccgctg
gatttgctgtacttcttcacaggcgtcaaatccctcttgaggttccctcgccttctaaag
tacaatgcattcttcgagtttaatgatcgtctggaagctgtgatgagcaaggcctacatt
tacagggtgatccggacgagtgcgtacctgctgtattctctgcactgtaatgcctgtatc
ttctattggggttctgactatgaaggactgggatctaccaaatgggtctataatggcaaa
ggaaacagttatattcgctgctactacttcgctgtgaagactctgatcaccatcggaggt
ttgcctgatcccaccactgtctttgaaatcgtctttcaactcgtcaactacttcgtggga
gtctttgctttctccatcatgattggtcagatgagagatgtatttggagctgctactgca
ggtgaggcctattacagacactgtgtggacagcaccgtcaaatacatgagctcctacagg
atcccccgcgaggtccagaaccgcgtcaaggtctggtacgactacacctggaagtcgcaa
ggcatgctggatgaacaggagttactcatacagctgccagataagatgcgtctggacatc
gctgcagatgtcaactacagcattgtcagtaaagtggcgctctttcagggctgtgacaga
cagatgatatttgacatgctaaagaggctgaaatctgtggtctaccttcctggagacttt
gtttgcaaaaaaggtgagatcggcagagagatgtacatcatcaaagctggagaggtgcag
gtggttggagggcctgatgggacgacggtgtttgtgactctgagagctggctctgtgttt
ggggaaatcagtttgctggcggttggtggcgggaaccggcgaacggcgaacgtgaaggcc
cacggttttgctaatctcttcatcctggataagaaggacctggcagagatcttagtgcac
taccccgaatcccagaagctgctgcgcaagaaggccaagaaaatgttgaccaaagataag
aagccggcagatgagaagggccaggctaaagatacgggtgaggtcatcccgcagaggcca
gagacgcccaaattatacaaggctgcgctggaggttggcacaggagagacttttgccagg
ctgaaggagtcgtataagggagcaactctagagccgtccactcccgtctccggaaggacc
tccacagctccagtgccccctccgtccccaatgcaccgccgttcgcccattccccggcct
cgtgtcccggacgaagatgacatggtatcggagaccaccgacagcaccatgatcatccgc
atgactccccgtgttgagggagaggagatcctctccgtggaagtcagtcccggagaggga
gcggagccagaagagcagagcaaaactgaagactag
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