Puntigrus tetrazona (Sumatra barb): 122362951
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Entry
122362951 CDS
T08985
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
122362951
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122362951
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122362951
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Tom5
Motif
Other DBs
NCBI-GeneID:
122362951
NCBI-ProteinID:
XP_043120701
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All DBs
Position
18:16075471..16085414
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AA seq
783 aa
AA seq
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MTLKCPAVAERLQTSSNLSENAHVKPALKVEEVEDGEMSVPQIIVPSELDSMTLTVPATN
LTSRSKAVDSERTQEEMAPGEEDDLNMSDLLNVNEGLERPASAASQTSIVVNERLQELVK
LFKQRTDHARDRLVDPDESDDESPSASPAKKPGEAPPPPPPPEEKKDDEEKAEEEVQIYE
FMGYKFPVPQFKMPQIPAWLRAILNYRFPSSIDPYTDLIYVVWLFFVTFAWNWNVWLIPV
RCTFPYQTPDNIHWWLLMDYLCDGIYLLDIFVMQPRLQFVRGGDIVCDKDDMRDNYRQTE
RFKMDVISLFPLDLLYFFTGVKSLLRFPRLLKYNAFFEFNDRLEAVMSKAYIYRVIRTSA
YLLYSLHCNACIFYWGSDYEGLGSTKWVYNGKGNSYIRCYYFAVKTLITIGGLPDPTTVF
EIVFQLVNYFVGVFAFSIMIGQMRDVFGAATAGEAYYRHCVDSTVKYMSSYRIPREVQNR
VKVWYDYTWKSQGMLDEQELLIQLPDKMRLDIAADVNYSIVSKVALFQGCDRQMIFDMLK
RLKSVVYLPGDFVCKKGEIGREMYIIKAGEVQVVGGPDGTTVFVTLRAGSVFGEISLLAV
GGGNRRTANVKAHGFANLFILDKKDLAEILVHYPESQKLLRKKAKKMLTKDKKPADEKGQ
AKDTGEVIPQRPETPKLYKAALEVGTGETFARLKESYKGATLEPSTPVSGRTSTAPVPPP
SPMHRRSPIPRPRVPDEDDMVSETTDSTMIIRMTPRVEGEEILSVEVSPGEGAEPEEQSK
TED
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgactttgaagtgccctgcagttgcagaaagactccagacctccagcaatctctcagaa
aacgcccatgtgaagccagcactgaaggtggaggaggtggaggacggagagatgagcgtt
cctcaaatcattgtgccctcagagttagactcaatgaccctcactgttcctgcaaccaat
ctgacatcccgcagtaaagctgtggattcagaaagaacgcaggaggagatggctcctgga
gaggaagatgacttgaacatgtctgatctgcttaatgtgaatgaaggtcttgagcgccca
gcgtctgcagccagccagacaagcattgtcgtgaatgagcgtctgcaggagctggtcaag
ctgtttaagcagcgaacggaccatgcgagagacagactggtcgatccagatgagtctgat
gatgaaagcccttcagcatctccggccaaaaagcctggtgaagccccacctccaccacct
cctccagaggaaaagaaagatgatgaggagaaggctgaagaggaggttcaaatctacgag
tttatgggatacaagttcccggttcctcagttcaaaatgccccagattcctgcgtggctg
agagccatcctgaactaccgtttcccatccagcattgatccctacacagacttgatctac
gtggtgtggctgttctttgtgacgttcgcgtggaactggaatgtttggctgatcccggtg
cgctgcactttcccgtaccagacgcctgacaacattcactggtggctgctgatggattac
ttatgtgacggcatttatcttctcgacatcttcgttatgcagcccagactgcagttcgtg
agaggaggggacatcgtgtgtgacaaagacgatatgagagacaactacaggcaaacagaa
cgattcaagatggatgtgatcagtctctttccgctggatttgctgtacttcttcacaggc
gtcaaatccctcttgaggttccctcgccttctaaagtacaatgcattcttcgagtttaat
gatcgtctggaagctgtgatgagcaaggcctacatttacagggtgatccggacgagtgcg
tacctgctgtattctctgcactgtaatgcctgtatcttctattggggttctgactatgaa
ggactgggatctaccaaatgggtctataatggcaaaggaaacagttatattcgctgctac
tacttcgctgtgaagactctgatcaccatcggaggtttgcctgatcccaccactgtcttt
gaaatcgtctttcaactcgtcaactacttcgtgggagtctttgctttctccatcatgatt
ggtcagatgagagatgtatttggagctgctactgcaggtgaggcctattacagacactgt
gtggacagcaccgtcaaatacatgagctcctacaggatcccccgcgaggtccagaaccgc
gtcaaggtctggtacgactacacctggaagtcgcaaggcatgctggatgaacaggagtta
ctcatacagctgccagataagatgcgtctggacatcgctgcagatgtcaactacagcatt
gtcagtaaagtggcgctctttcagggctgtgacagacagatgatatttgacatgctaaag
aggctgaaatctgtggtctaccttcctggagactttgtttgcaaaaaaggtgagatcggc
agagagatgtacatcatcaaagctggagaggtgcaggtggttggagggcctgatgggacg
acggtgtttgtgactctgagagctggctctgtgtttggggaaatcagtttgctggcggtt
ggtggcgggaaccggcgaacggcgaacgtgaaggcccacggttttgctaatctcttcatc
ctggataagaaggacctggcagagatcttagtgcactaccccgaatcccagaagctgctg
cgcaagaaggccaagaaaatgttgaccaaagataagaagccggcagatgagaagggccag
gctaaagatacgggtgaggtcatcccgcagaggccagagacgcccaaattatacaaggct
gcgctggaggttggcacaggagagacttttgccaggctgaaggagtcgtataagggagca
actctagagccgtccactcccgtctccggaaggacctccacagctccagtgccccctccg
tccccaatgcaccgccgttcgcccattccccggcctcgtgtcccggacgaagatgacatg
gtatcggagaccaccgacagcaccatgatcatccgcatgactccccgtgttgagggagag
gagatcctctccgtggaagtcagtcccggagagggagcggagccagaagagcagagcaaa
actgaagactag
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