Pseudonaja textilis (eastern brown snake): 113434343
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Entry
113434343 CDS
T09005
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113434343 (CSTF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptex03019
]
113434343 (CSTF1)
Messenger RNA biogenesis [BR:
ptex03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
113434343 (CSTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
CSTF1_dimer
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_EIPR1
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
VPS8_N
PROPPIN
Beta-prop_WDR11_1st
Beta-prop_WDR75_2nd
Beta-prop_HPS5
Frtz
Beta-prop_SPT8
DUF7099
Motif
Other DBs
NCBI-GeneID:
113434343
NCBI-ProteinID:
XP_026553251
Ensembl:
ENSPTXG00000002250
UniProt:
A0A670Y0W7
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MCGASMQQPVRRSGPRARLLLQPPQPPPPLPPPPPPAPLHLPAQSPLDAVGPPAAVLSGD
RSRTKDGLTPGRQPLFTMYRPKVSLKDRQQLYRLIISQLLYDGYINIANGLINEVKPQSV
CAPSEQLLHLIKLGMENDDSAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCY
VTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENH
PVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSI
SFHPSGDFILVGTQHPTLRLYDVNTFQCFVSCNPQDQHTDAICSVNYNASANMYVTGSKD
GCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVK
YTGAGLSGRQVHRTQAVFNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNSIVRCI
VHSPTNPGFMTCSDDYRARFWYRRSTTD
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggggcttcgatgcagcagcctgttcgacggagcggtcctcgggccagactgctg
ctacagccgccgcaaccgccgccccctctgcctccgccgccgccgcccgctccgcttcac
ctgcccgcccagtcgccccttgacgccgtggggcccccggcagccgttctgagcggagat
cgatcgcggacgaaggacgggctcacacctggaaggcaacccttgttcacaatgtataga
ccaaaagtaagccttaaagaccgacaacaactttacaggcttattattagtcagctgtta
tatgatggatatatcaatattgctaatggtctgataaatgaagtgaagccacagtctgtc
tgtgcaccctctgaacaactgttgcatcttattaaactaggaatggaaaatgacgatagt
gcagttcagtatgcaattggacgctctgatacagtagctcctggaacaggaattgacttg
gagtttgatgcagatgtacagactatgtccccagaagcatctgaatatgagacatgttat
gtcacatctcacaaaggaccatgtcgtgtagctacgtacagcagagatggacagttaatt
gctacaggatccgctgatgcatcaataaaaatacttgataccgaaagaatgttagcaaaa
agtgctatgcccattgaggttatgatgaatgaaacagctcagcagaacatggagaaccat
ccagttattaggactctttacgatcatgtagatgaggtcacctgtttagcttttcatcca
actgaacaaatccttgcatctggatcaagagactacactcttaaattgtttgactactca
aaaccatctgccaagagagctttcaaatatattcaggaagcagaaatgctgcgctctata
tctttccatccttctggggatttcatacttgttgggacacagcatcctaccctgcggctc
tatgatgtaaatactttccagtgctttgtatcctgcaatccccaagatcaacatacagat
gctatatgctcagttaattacaatgcaagtgctaacatgtatgtaacaggcagcaaagat
ggatgcatcaaattgtgggatggagtttcaaatcgttgtatcaccacttttgagaaggcg
catgatggtgctgaagtctgttctgccattttctctaagaactccaagtacatactttca
agtggaaaggattctgtggctaaactgtgggagatatcaacaggaaggacactagtcaaa
tatacaggagctggcctgagtggacgccaggttcataggacacaggctgtttttaatcac
accgaagactatgtgctccttcccgatgaaaggaccattagcctttgctgctgggattca
cgaacggcggagcgaagaaatcttctttccttggggcataatagcatcgttcgctgcatt
gtccattcacctacaaatcctggattcatgacttgcagtgatgactatagagctcgattt
tggtaccgaagatcaaccacagattaa
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integrated database retrieval system
